Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B2J7T6

- B2J7T6_NOSP7

UniProt

B2J7T6 - B2J7T6_NOSP7

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

RNA polymerase, sigma-24 subunit, ECF subfamily

Gene

Npun_F4153

Organism
Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
  3. sigma factor activity Source: UniProtKB-KW

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Sigma factorSAAS annotation

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciNPUN63737:GJNP-4022-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase, sigma-24 subunit, ECF subfamilyImported
Gene namesi
Ordered Locus Names:Npun_F4153Imported
OrganismiNostoc punctiforme (strain ATCC 29133 / PCC 73102)Imported
Taxonomic identifieri63737 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
ProteomesiUP000001191: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi63737.Npun_F4153.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1595.
HOGENOMiHOG000094755.
KOiK03088.
OMAiTTREFYE.
OrthoDBiEOG6ZD6DW.
PhylomeDBiB2J7T6.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view]
SUPFAMiSSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsiTIGR02937. sigma70-ECF. 1 hit.

Sequencei

Sequence statusi: Complete.

B2J7T6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQSITVSWS TVDAKYPEAS VQVDKLPNHD LILRCQAGLR PDRVAFSELL
60 70 80 90 100
RRYQSQVDRV LYHLAPDWAD RADLAQEVWI RVYRNINRLQ EPAKFRGWLS
110 120 130 140 150
RIATNLFYDE LRKRKRVVSP LSLDAPRSLE DGEMDWEIAG DTPGPEEELT
160 170 180 190 200
TREFYEQLRE AIADLPEVFR TTIVLREIEG MAYEEIAEIT GVSLGTVKSR
210
IARARSRLQA YLQNYLDS
Length:218
Mass (Da):25,259
Last modified:June 10, 2008 - v1
Checksum:i1C4A94CC8D1E9AC2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001037 Genomic DNA. Translation: ACC82531.1.
RefSeqiYP_001867474.1. NC_010628.1.

Genome annotation databases

EnsemblBacteriaiACC82531; ACC82531; Npun_F4153.
GeneIDi6253498.
KEGGinpu:Npun_F4153.
PATRICi22761428. VBINosPun48114_4873.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001037 Genomic DNA. Translation: ACC82531.1 .
RefSeqi YP_001867474.1. NC_010628.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 63737.Npun_F4153.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACC82531 ; ACC82531 ; Npun_F4153 .
GeneIDi 6253498.
KEGGi npu:Npun_F4153.
PATRICi 22761428. VBINosPun48114_4873.

Phylogenomic databases

eggNOGi COG1595.
HOGENOMi HOG000094755.
KOi K03088.
OMAi TTREFYE.
OrthoDBi EOG6ZD6DW.
PhylomeDBi B2J7T6.

Enzyme and pathway databases

BioCyci NPUN63737:GJNP-4022-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view ]
SUPFAMi SSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsi TIGR02937. sigma70-ECF. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29133 / PCC 73102Imported.

Entry informationi

Entry nameiB2J7T6_NOSP7
AccessioniPrimary (citable) accession number: B2J7T6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: October 1, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3