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B2J7T6

- B2J7T6_NOSP7

UniProt

B2J7T6 - B2J7T6_NOSP7

Protein
Submitted name:

RNA polymerase, sigma-24 subunit, ECF subfamily

Gene

Npun_F4153

Organism
Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (10 Jun 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro
    3. sigma factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. DNA-templated transcription, initiation Source: InterPro

    Keywords - Molecular functioni

    Sigma factorSAAS annotation

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-bindingSAAS annotation

    Enzyme and pathway databases

    BioCyciNPUN63737:GJNP-4022-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RNA polymerase, sigma-24 subunit, ECF subfamilyImported
    Gene namesi
    Ordered Locus Names:Npun_F4153Imported
    OrganismiNostoc punctiforme (strain ATCC 29133 / PCC 73102)Imported
    Taxonomic identifieri63737 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
    ProteomesiUP000001191: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi63737.Npun_F4153.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1595.
    HOGENOMiHOG000094755.
    KOiK03088.
    OMAiTTREFYE.
    OrthoDBiEOG6ZD6DW.
    PhylomeDBiB2J7T6.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR014284. RNA_pol_sigma-70_dom.
    IPR007627. RNA_pol_sigma70_r2.
    IPR013249. RNA_pol_sigma70_r4_t2.
    IPR013325. RNA_pol_sigma_r2.
    IPR013324. RNA_pol_sigma_r3_r4.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF04542. Sigma70_r2. 1 hit.
    PF08281. Sigma70_r4_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF88659. SSF88659. 1 hit.
    SSF88946. SSF88946. 1 hit.
    TIGRFAMsiTIGR02937. sigma70-ECF. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B2J7T6-1 [UniParc]FASTAAdd to Basket

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    MSQSITVSWS TVDAKYPEAS VQVDKLPNHD LILRCQAGLR PDRVAFSELL    50
    RRYQSQVDRV LYHLAPDWAD RADLAQEVWI RVYRNINRLQ EPAKFRGWLS 100
    RIATNLFYDE LRKRKRVVSP LSLDAPRSLE DGEMDWEIAG DTPGPEEELT 150
    TREFYEQLRE AIADLPEVFR TTIVLREIEG MAYEEIAEIT GVSLGTVKSR 200
    IARARSRLQA YLQNYLDS 218
    Length:218
    Mass (Da):25,259
    Last modified:June 10, 2008 - v1
    Checksum:i1C4A94CC8D1E9AC2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001037 Genomic DNA. Translation: ACC82531.1.
    RefSeqiYP_001867474.1. NC_010628.1.

    Genome annotation databases

    EnsemblBacteriaiACC82531; ACC82531; Npun_F4153.
    GeneIDi6253498.
    KEGGinpu:Npun_F4153.
    PATRICi22761428. VBINosPun48114_4873.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001037 Genomic DNA. Translation: ACC82531.1 .
    RefSeqi YP_001867474.1. NC_010628.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 63737.Npun_F4153.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACC82531 ; ACC82531 ; Npun_F4153 .
    GeneIDi 6253498.
    KEGGi npu:Npun_F4153.
    PATRICi 22761428. VBINosPun48114_4873.

    Phylogenomic databases

    eggNOGi COG1595.
    HOGENOMi HOG000094755.
    KOi K03088.
    OMAi TTREFYE.
    OrthoDBi EOG6ZD6DW.
    PhylomeDBi B2J7T6.

    Enzyme and pathway databases

    BioCyci NPUN63737:GJNP-4022-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR014284. RNA_pol_sigma-70_dom.
    IPR007627. RNA_pol_sigma70_r2.
    IPR013249. RNA_pol_sigma70_r4_t2.
    IPR013325. RNA_pol_sigma_r2.
    IPR013324. RNA_pol_sigma_r3_r4.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF04542. Sigma70_r2. 1 hit.
    PF08281. Sigma70_r4_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88659. SSF88659. 1 hit.
    SSF88946. SSF88946. 1 hit.
    TIGRFAMsi TIGR02937. sigma70-ECF. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 29133 / PCC 73102Imported.

    Entry informationi

    Entry nameiB2J7T6_NOSP7
    AccessioniPrimary (citable) accession number: B2J7T6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 10, 2008
    Last sequence update: June 10, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3