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B2J7T6

- B2J7T6_NOSP7

UniProt

B2J7T6 - B2J7T6_NOSP7

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Protein
Submitted name: RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Npun_F4153
Organism
Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
  3. sigma factor activity Source: UniProtKB-KW

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Sigma factorSAAS annotations

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-bindingSAAS annotations

Enzyme and pathway databases

BioCyciNPUN63737:GJNP-4022-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase, sigma-24 subunit, ECF subfamilyImported
Gene namesi
Ordered Locus Names:Npun_F4153Imported
OrganismiNostoc punctiforme (strain ATCC 29133 / PCC 73102)Imported
Taxonomic identifieri63737 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
ProteomesiUP000001191: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi63737.Npun_F4153.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1595.
HOGENOMiHOG000094755.
KOiK03088.
OMAiTTREFYE.
OrthoDBiEOG6ZD6DW.
PhylomeDBiB2J7T6.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view]
SUPFAMiSSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsiTIGR02937. sigma70-ECF. 1 hit.

Sequencei

Sequence statusi: Complete.

B2J7T6-1 [UniParc]FASTAAdd to Basket

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MSQSITVSWS TVDAKYPEAS VQVDKLPNHD LILRCQAGLR PDRVAFSELL    50
RRYQSQVDRV LYHLAPDWAD RADLAQEVWI RVYRNINRLQ EPAKFRGWLS 100
RIATNLFYDE LRKRKRVVSP LSLDAPRSLE DGEMDWEIAG DTPGPEEELT 150
TREFYEQLRE AIADLPEVFR TTIVLREIEG MAYEEIAEIT GVSLGTVKSR 200
IARARSRLQA YLQNYLDS 218
Length:218
Mass (Da):25,259
Last modified:June 10, 2008 - v1
Checksum:i1C4A94CC8D1E9AC2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001037 Genomic DNA. Translation: ACC82531.1.
RefSeqiYP_001867474.1. NC_010628.1.

Genome annotation databases

EnsemblBacteriaiACC82531; ACC82531; Npun_F4153.
GeneIDi6253498.
KEGGinpu:Npun_F4153.
PATRICi22761428. VBINosPun48114_4873.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001037 Genomic DNA. Translation: ACC82531.1 .
RefSeqi YP_001867474.1. NC_010628.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 63737.Npun_F4153.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACC82531 ; ACC82531 ; Npun_F4153 .
GeneIDi 6253498.
KEGGi npu:Npun_F4153.
PATRICi 22761428. VBINosPun48114_4873.

Phylogenomic databases

eggNOGi COG1595.
HOGENOMi HOG000094755.
KOi K03088.
OMAi TTREFYE.
OrthoDBi EOG6ZD6DW.
PhylomeDBi B2J7T6.

Enzyme and pathway databases

BioCyci NPUN63737:GJNP-4022-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view ]
SUPFAMi SSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsi TIGR02937. sigma70-ECF. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29133 / PCC 73102.

Entry informationi

Entry nameiB2J7T6_NOSP7
AccessioniPrimary (citable) accession number: B2J7T6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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