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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

Npun_F4644

Organism
Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotation, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Ordered Locus Names:Npun_F4644Imported
OrganismiNostoc punctiforme (strain ATCC 29133 / PCC 73102)Imported
Taxonomic identifieri63737 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
Proteomesi
  • UP000001191 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi63737.Npun_F4644.

Structurei

3D structure databases

ProteinModelPortaliB2IXU2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini208 – 483SAM_MT_RSMB_NOPInterPro annotationAdd BLAST276

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.
PhylomeDBiB2IXU2.

Family and domain databases

Gene3Di1.10.940.10. 2 hits.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2IXU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNPRQLAFI ALRDVHKGAY ADVALDRVLQ KVNLPDRDRR LVTELVYGSV
60 70 80 90 100
RRQRTLDTLI DQFAKNKSHQ QPQDLRTILH LGFYQLRYQE RIPASAAVNT
110 120 130 140 150
TVQLAKENGF SGLTGFVNGL LRQYLRKAGE QGGRGAGGQR SRGAEEKDSL
160 170 180 190 200
LVPVPQPPVP STQAPVLNFD PLQLPENPVE RLGILHSFPD WIIQVWLEQL
210 220 230 240 250
GLTETEQLCE WMNQSPTIDL RINPLCTSIE EVEAALQSVG LLVRRIPDLP
260 270 280 290 300
QALRFMGNTG SIQKLPGFKE GWWTVQDASA QLVSHLLDPQ PGEVVIDVCA
310 320 330 340 350
APGGKTTHIA ELMADSGKIW ACDRTASRLR KLQENSQRLN LQSIQIYTGD
360 370 380 390 400
SRHSNQFQNT ADRVLLDAPC SGLGTMHRHA DARWRQTPES VRELSVLQKE
410 420 430 440 450
LLTHTSTFVK AGGVLVYATC TLHPAENEEV ISAFLAESPH WQIEPPRGIE
460 470 480
LAASAYSTPQ GWFKVWPHRQ DMDGFLMVRL RKTNNSE
Length:487
Mass (Da):54,522
Last modified:June 10, 2008 - v1
Checksum:i9853DC301C93D405
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001037 Genomic DNA. Translation: ACC83001.1.

Genome annotation databases

EnsemblBacteriaiACC83001; ACC83001; Npun_F4644.
KEGGinpu:Npun_F4644.
PATRICi22762585. VBINosPun48114_5439.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001037 Genomic DNA. Translation: ACC83001.1.

3D structure databases

ProteinModelPortaliB2IXU2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi63737.Npun_F4644.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACC83001; ACC83001; Npun_F4644.
KEGGinpu:Npun_F4644.
PATRICi22762585. VBINosPun48114_5439.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.
PhylomeDBiB2IXU2.

Family and domain databases

Gene3Di1.10.940.10. 2 hits.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB2IXU2_NOSP7
AccessioniPrimary (citable) accession number: B2IXU2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: November 30, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.