Skip Header

Contribute Send feedback
Read comments (?) or add your own

B2IX23 (B2IX23_NOSP7) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Biosynthetic arginine decarboxylase HAMAP MF_01417
Short name=ADC HAMAP MF_01417
EC=4.1.1.19 HAMAP MF_01417
Gene names
Name:speA HAMAP MF_01417
Ordered Locus Names:Npun_F6279
OrganismNostoc punctiforme (strain ATCC 29133 / PCC 73102) [Complete proteome] [HAMAP]
Taxonomic identifier63737 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Nostocales › Nostocaceae › Nostoc

Protein attributes

Sequence length672 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the biosynthesis of agmatine from arginine By similarity. HAMAP MF_01417

Catalytic activity

L-arginine = agmatine + CO2. HAMAP MF_01417 SAAS SAAS009006

Cofactor

Magnesium By similarity. HAMAP MF_01417 SAAS SAAS009006

Pyridoxal phosphate By similarity. HAMAP MF_01417 SAAS SAAS000183

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1. HAMAP MF_01417

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. HAMAP MF_01417

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region324 – 33411Substrate-binding By similarity HAMAP MF_01417

Amino acid modifications

Modified residue1421N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01417

Sequences

Sequence LengthMass (Da)Tools
B2IX23 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: C79C18097D0B30CE

FASTA67275,938
        10         20         30         40         50         60 
MGVESTATSD EVVPVPSNGQ KSEVKNHKQK KLLPPSTTTG SLPRSWKIED SEELYRIEGW 

        70         80         90        100        110        120 
GQPYFSISAA GHVTVSPKGD RGGSLDLFEL VNSMKQRNLG LPMLIRFSDI LEDRIERLNA 

       130        140        150        160        170        180 
CFAKAIARYN YPGVYRGVFP VKCNQERHLI EDLVKFGKPH QFGLEAGSKP ELMIALAVLD 

       190        200        210        220        230        240 
TPGALLVCNG YKDREYIETA MLAQRLGQTP IIVLEQIEEV DLVIDANRQL GIKPILGVRA 

       250        260        270        280        290        300 
KLSTQGMGRW GASSGDRAKF GLTMPEVIEA VDKLREANLL DSLQLMHFHI GSQISAINVI 

       310        320        330        340        350        360 
KDAIQEASRI YVELAMLGAD MKYLDVGGGL GVDYDGSQTN FYASKNYNMQ NYANDIVAEL 

       370        380        390        400        410        420 
KDTCAERQIT VPTLISESGR AIASHQSVLI FDVLSTSDVP LDSPEPPQEG ESPIINYLWE 

       430        440        450        460        470        480 
SYQSINQENY QELYHDAAQF KEEAISRFNL GILRLRERAK AERLYWACCQ KILNITRQQE 

       490        500        510        520        530        540 
YVPDELEDLE KIMASIYYVN MSVFQSAPDC WAIDQLFPIM PIHRLDEEPI RRGILADLTC 

       550        560        570        580        590        600 
DSDGKIDRFI DLRDVKSVLE LHTYKPGEPY YLGMFLNGAY QEIMGNLHNL FGDTNAVHIQ 

       610        620        630        640        650        660 
LTPKGYQIEH VVKGDTMSEV VSYVQYDSED MVENIRQRCE KALEEKRITL AESQRLLQTY 

       670 
EQSLRRYTYL NS

« Hide

References

[1]"Complete sequence of chromosome of Nostoc punctiforme ATCC 29133."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Meeks J.C. expand/collapse author list , Elhai J., Campbell E.L., Thiel T., Longmire J., Potts M., Atlas R.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29133 / PCC 73102.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001037 Genomic DNA. Translation: ACC84558.1.
RefSeqYP_001869501.1. NC_010628.1.

3D structure databases

ProteinModelPortalB2IX23.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2IX23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6255626.
GenomeReviewsGene locus Npun_F6279 in contig CP001037_GR.
KEGGnpu:Npun_F6279.
PATRIC22766481. VBINosPun48114_7362.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG321436.
OMALICNGYK.
PhylomeDBB2IX23.
ProtClustDBPRK05354.

Family and domain databases

HAMAPMF_01417. SpeA.
[Tree]
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 2 hits.
KOK01585.
PANTHERPTHR11482:SF3. Arg_decrbxlase. 1 hit.
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR01273. SpeA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2IX23_NOSP7
AccessionPrimary (citable) accession number: B2IX23
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info