B2IUW9 (B2IUW9_NOSP7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region EMBL ACC84362.1
EC=3.2.1.54 EMBL ACC84362.1

Gene names

Ordered Locus Names:

Npun_R6073

Organism

Nostoc punctiforme (strain ATCC 29133 / PCC 73102) [Complete proteome] [HAMAP]

Taxonomic identifier

63737 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Nostoc

Protein attributes

Sequence length	488 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACC84362.1 Hydrolase
Technical term	3D-structure PDB 2WCS PDB 2WKG PDB 2WC7 Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro cyclomaltodextrinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2IUW9 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 8BAF580AC928B896	FASTA	488	55,582
	10 20 30 40 50 60 MQIQTPDWVK HAVFYQIFPD RFARSKQPRK RLLQEARWED WDSMPTLQGY KGGDLWGIME 70 80 90 100 110 120 DLDYIQNLGI NAIYFTPIFQ SASNHRYHTH DYYQVDPMLG GNEAFKELLD AAHQRNIKVV 130 140 150 160 170 180 LDGVFNHSSR GFFFFHDVLE NGPHSPWVNW FKIEGWPLSP YNGEFPANYV GWAGNRALPE 190 200 210 220 230 240 FNHDNPEVRE YIMEIAEYWL KFGIDGWRLD VPFEIKTPGF WQEFRDRTKA INPEAYIVGE 250 260 270 280 290 300 VWGDSRQWLD GTQFDGVMNY LFAGPTIAFA AGDRVVLEQV QSRDYQPYPP LFAAEYATKI 310 320 330 340 350 360 QEVLQLYPWE IQLTQLNLLA SHDTARLMTI AGGDIASVEL STLLLLTFPG APSIYYGDEV 370 380 390 400 410 420 GLPGGIDPDS RRGFPLEANW NQEIFNTHRQ LITIRQTYPA LRTGDYQVLY AQGQLYLFAR 430 440 450 460 470 480 TLGTEELIIA INAGTSSATA NVDVASLHTQ PNKLLYGTAE AEWNGEEGTQ QLSLTLPARS GCILGTGD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of chromosome of Nostoc punctiforme ATCC 29133." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Meeks J.C. , Elhai J., Campbell E.L., Thiel T., Longmire J., Potts M., Atlas R. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29133 / PCC 73102.
[2]	"Structural features of the Nostoc punctiforme debranching enzyme reveal the basis of its mechanism and substrate specificity." Dumbrepatil A.B., Choi J.H., Park J.T., Kim M.J., Kim T.J., Woo E.J., Park K.H. Proteins 78:348-356(2010) [PubMed: 19768689] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.37 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP001037 Genomic DNA. Translation: ACC84362.1.

RefSeq

YP_001869305.1. NC_010628.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2WC7	X-ray	2.37	A	1-488	[»]
2WCS	X-ray	2.80	A	1-488	[»]
2WKG	X-ray	3.00	A	1-488	[»]

ProteinModelPortal

B2IUW9.

ModBase

Search...

Protein-protein interaction databases

STRING

B2IUW9.

Protein family/group databases

CAZy

GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

6255422.

GenomeReviews

Gene locus Npun_R6073 in contig CP001037_GR.

KEGG

npu:Npun_R6073.

PATRIC

22765953. VBINosPun48114_7101.

Organism-specific databases

CMR

Search...

Phylogenomic databases

HOGENOM

HBG726713.

OMA

FHINEYP.

PhylomeDB

B2IUW9.

ProtClustDB

CLSK896236.

Family and domain databases

InterPro

IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

PANTHER

PTHR10357. Alpha_amylase. 1 hit.

Pfam

PF00128. Alpha-amylase. 1 hit.
[Graphical view]

SMART

SM00642. Aamy. 1 hit.
[Graphical view]

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

B2IUW9_NOSP7

Accession

Primary (citable) accession number: B2IUW9

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)