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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

sunL

Organism
Streptococcus pneumoniae (strain CGSP14)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciSPNE516950:GI38-1720-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Name:sunLImported
Ordered Locus Names:SPCG_1707Imported
OrganismiStreptococcus pneumoniae (strain CGSP14)Imported
Taxonomic identifieri516950 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000001682 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliB2IS84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini159 – 436278SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiEOG6091D0.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2IS84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTKVETARS LALAVLEDVF VNQAYSNIAL NKHLKGSQLS AADKGLVTEL
60 70 80 90 100
VYGTVARKLT LEWYLSHFIE DRDQLDSWLY VLLLMSVYQL RYLDKIPDHA
110 120 130 140 150
VVNEAVELAK LRKKGSEKLV NAVLRRILRE GWPDIANIKR KNKRDSIAYS
160 170 180 190 200
LPVWLVTKLK EEYGEERAKA IFESLLVRNK ASIRVTDLSR KEEIQALLEA
210 220 230 240 250
NSSLLATTGL VKEQGHFAGH NLFADGAITI QDESSQLVAP TLDLQGDERV
260 270 280 290 300
LDACAAPGGK TAHIASYLTT GQVTALDLYD HKLDLIQENA QRLGVADRVQ
310 320 330 340 350
TQKLDARKVH EFFDQDSFDK ILVDAPCSGI GLLRRKPDIK YNKETADFAS
360 370 380 390 400
LQEIQLEILG SVCQILGKGG IITYSTCTIV SEENFQVVKA FLESHPEFEQ
410 420 430
VKLEHECKDI MKDGCILITP ELYGSDGFFI SQFRKISD
Length:438
Mass (Da):49,098
Last modified:June 10, 2008 - v1
Checksum:iE3E4FB62D586E37B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001033 Genomic DNA. Translation: ACB90959.1.

Genome annotation databases

EnsemblBacteriaiACB90959; ACB90959; SPCG_1707.
KEGGispw:SPCG_1707.
PATRICi19679738. VBIStrPne123335_1826.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001033 Genomic DNA. Translation: ACB90959.1.

3D structure databases

ProteinModelPortaliB2IS84.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB90959; ACB90959; SPCG_1707.
KEGGispw:SPCG_1707.
PATRICi19679738. VBIStrPne123335_1826.

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiEOG6091D0.

Enzyme and pathway databases

BioCyciSPNE516950:GI38-1720-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14."
    Ding F., Tang P., Hsu M.-H., Cui P., Hu S., Yu J., Chiu C.-H.
    BMC Genomics 10:158-158(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CGSP14Imported.

Entry informationi

Entry nameiB2IS84_STRPS
AccessioniPrimary (citable) accession number: B2IS84
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 11, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.