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B2IRV3 (B2IRV3_STRPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:SPCG_1670
OrganismStreptococcus pneumoniae (strain CGSP14) [Complete proteome] [HAMAP] EMBL ACB90922.1
Taxonomic identifier516950 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus ›

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2IRV3 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 71B255666051B88F

FASTA37440,908
        10         20         30         40         50         60 
MSFWRKIMKA SPHRPTKALI HLGAIRQNIQ QMGAHIPQGT LKWAVVKANA YGHGAVAVAK 

        70         80         90        100        110        120 
AIQDDVDGFC VSNIDEAIEL RQAGLSKPIL ILGVSEIEAV ALAKEYDFTL TVAGLEWIQA 

       130        140        150        160        170        180 
LLDKEVDLTG LTVHLKIDSG MGRIGFREVS EVEQAQDLLQ KHGVCVEGIF THFATADEES 

       190        200        210        220        230        240 
DDYFNAQLER FKTILASMKE VPELVHASNS ATTLWHVETI FNAVRMGDAM YGLNPSGAVL 

       250        260        270        280        290        300 
DLPYDLIPAL TLESALVHVK TVPAGACMGY GATYQADSEQ VIATVPIGYA DGWTRDMQNF 

       310        320        330        340        350        360 
SVLVDGQACP IVGRVSMDQI TIRLPKLYPL GTKVTLIGSN GDKEITATQV ATYRVTINYE 

       370 
VVCLLSDRIP REYY

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References

[1]"Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14."
Ding F., Tang P., Hsu M.-H., Cui P., Hu S., Yu J., Chiu C.-H.
BMC Genomics 10:158-158(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CGSP14.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001033 Genomic DNA. Translation: ACB90922.1.
RefSeqYP_001836387.1. NC_010582.1.

3D structure databases

ProteinModelPortalB2IRV3.
ModBaseSearch...

Protein-protein interaction databases

STRING516950.SPCG_1670.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB90922; ACB90922; SPCG_1670.
GeneID6217624.
KEGGspw:SPCG_1670.
PATRIC19679658. VBIStrPne123335_1786.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAIRLPKAY.
ProtClustDBPRK00053.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2IRV3_STRPS
AccessionPrimary (citable) accession number: B2IRV3
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info