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B2IQJ9 (B2IQJ9_STRPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:amy EMBL ACB90623.1
Ordered Locus Names:SPCG_1371 EMBL ACB90623.1
OrganismStreptococcus pneumoniae (strain CGSP14) [Complete proteome] [HAMAP] EMBL ACB90623.1
Taxonomic identifier516950 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
B2IQJ9 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: D015A4A5194BFBC9

FASTA48455,987
        10         20         30         40         50         60 
MQNQTLMQYF EWYLPHDGQH WTRLAENAPH LAHLGISHVW MPPAFKATNE KDVGYGVYDL 

        70         80         90        100        110        120 
FDLGEFNQKG TVRTKYGFKE DYLQAIQALK AQGIQPMADV VLNHKAAADH REAFQVIEVD 

       130        140        150        160        170        180 
PVDRTVELGE PFTINGWTSF TFDGRQDTYN GFHWHWYHFT GTDYDAKRRK SGIYLIQGDN 

       190        200        210        220        230        240 
KGWANEELVD NENGNYDYLM YADLDFKHPE VIQNIYDWAD WFMETTGVAG FRLDAVKHID 

       250        260        270        280        290        300 
SFFMRNFIRD MKEKYGDDFY VFGEFWNPDK EANLDYLEKT EEHFDLVDVR LHQNLFEASQ 

       310        320        330        340        350        360 
AGANYDLRGI FTDSLVELKP DKAVTFVDNH DTQRGQALES TVEEWFKPAA YALILLRQDG 

       370        380        390        400        410        420 
LPCVFYGDYY GISGQYAQED FKEILDRLLA IRKDLAYGEQ NDYFDHANCI GWVRSGAENQ 

       430        440        450        460        470        480 
SPIAVLISND QENSKSMFVG QEWTNQTFVD LLGNHQGQVT IDEEGYGQFP VSARSVSVWA 


VNTI 

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References

[1]"Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14."
Ding F., Tang P., Hsu M.H., Cui P., Hu S., Yu J., Chiu C.H.
BMC Genomics 10:158-158(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CGSP14 EMBL ACB90623.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001033 Genomic DNA. Translation: ACB90623.1.
RefSeqYP_001836088.1. NC_010582.1.

3D structure databases

ProteinModelPortalB2IQJ9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING516950.SPCG_1371.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB90623; ACB90623; SPCG_1371.
GeneID6218550.
KEGGspw:SPCG_1371.
PATRIC19679012. VBIStrPne123335_1462.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycSPNE516950:GI38-1383-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2IQJ9_STRPS
AccessionPrimary (citable) accession number: B2IQJ9
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)