B2IG55 (B2IG55_BEII9) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 32.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase 2 HAMAP MF_00222 EC=1.1.1.25 HAMAP MF_00222 | ||||
| Gene names |
| ||||
| Organism | Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 395963 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Beijerinckia |
Protein attributes
| Sequence length | 284 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222 SAAS SAAS011342 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222 SAAS SAAS011342 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. HAMAP MF_00222 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis HAMAP MF_00222 SAAS SAAS011342 |
| Ligand | NADP HAMAP MF_00222 SAAS SAAS011342 |
| Molecular function | Oxidoreductase HAMAP MF_00222 RuleBase RU004037 SAAS SAAS011342 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 136 – 140 | 5 | NADP By similarity HAMAP MF_00222 | ||||||
Sites | |||||||||
| Active site | 74 | 1 | Proton acceptor By similarity HAMAP MF_00222 | ||||||
Sequences
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References
| [1] | "Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N. Richardson P.Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9039 / DSM 1715 / NCIB 8712. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001016 Genomic DNA. Translation: ACB97129.1. |
| RefSeq | YP_001834618.1. NC_010581.1. |
3D structure databases | |
| ProteinModelPortal | B2IG55. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | B2IG55. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 6201485. |
| GenomeReviews | Gene locus Bind_3572 in contig CP001016_GR. |
| KEGG | bid:Bind_3572. |
| PATRIC | 21090281. VBIBeiInd21058_4039. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG553408. |
| OMA | LHLKTHG. |
| ProtClustDB | CLSK2405983. |
Family and domain databases | |
| HAMAP | MF_00222. Shikimate_DH_AroE. [Tree] |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR011342. Shikimate_DH. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00014. |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00507. AroE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | B2IG55_BEII9 | ||||||||
| Accession | Primary (citable) accession number: B2IG55 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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