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B2IEC4 (B2IEC4_BEII9) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Bind_1898
OrganismBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) [Complete proteome] [HAMAP]
Taxonomic identifier395963 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Beijerinckia

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3371Proton acceptor By similarity HAMAP MF_00641
Active site6271Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
B2IEC4 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 4D3B6152EAF614D1

FASTA72778,557
        10         20         30         40         50         60 
MGYLSINGLS VDSELHDFIV KEAIPGSGVS AEQFWTGLAD LVAAKSATNR ALLAKRDELQ 

        70         80         90        100        110        120 
AKIDAYYRSG GSKDPAATEA FLREIGYLLP EPAPQAIETQ NVDDEIATIA GPQLVVPGSN 

       130        140        150        160        170        180 
ARYALNAANA RWGSLYDALY GTDAIPETNG AERGKGFNPT RGALVVAKAK TILDQSVPLD 

       190        200        210        220        230        240 
GASYADVTAY QIEGSTLKAT TKDGKSIGLK TPEQFAGFTG TKEAPATILL RHNHLHFELV 

       250        260        270        280        290        300 
VNANHPVGKT DPAGLADVII ESAVSTIIDM EDSVAVVDAA DKVALYRNIL GLMQGTLSDT 

       310        320        330        340        350        360 
FVKNGASLTR TLHDDRIYQT GDGGTLRLHG RSLLLIRNVG HHMFTDAVLD ASGAEIPENM 

       370        380        390        400        410        420 
LDGMVTALVA RHDLYGTHEH HNSRKGSVYI VKPKMHGPQE VAFANSVFEH IELAIGLPAN 

       430        440        450        460        470        480 
TLKIGIMDEE RRTTVNLMAG IQAASKRIVF INTGFLDRTG DEIHTAMEAG PMVRKNSIKN 

       490        500        510        520        530        540 
EAWLKAYEDN NVDVGLASGL PGHAQIGKGM WAAPDAMADM LTQKIGHPRA GANTAWVPSP 

       550        560        570        580        590        600 
TAATLHALHY HEVDVFERQK ELAGRPRAKL HDLLTVPVAK TTYSAQEIQE ELDNNAQGLL 

       610        620        630        640        650        660 
GYVVRWIDQG VGCSKVPDIH NVALMEDRAT LRISSQHIAN WLYHKIVTES QVLETLKRMA 

       670        680        690        700        710        720 
VVVDQQNAGD SAYRPMAPAF DGIAFKAACD LVFKGREQPN GYTEFLLHSR RREVKAEQAQ 


SGQASAA

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References

[1]"Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N. expand/collapse author list , Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9039 / DSM 1715 / NCIB 8712.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001016 Genomic DNA. Translation: ACB95522.1.
RefSeqYP_001833011.1. NC_010581.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB2IEC4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6199576.
GenomeReviewsGene locus Bind_1898 in contig CP001016_GR.
KEGGbid:Bind_1898.
PATRIC21086669. VBIBeiInd21058_2266.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG350005.
OMAPKMHGPD.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2IEC4_BEII9
AccessionPrimary (citable) accession number: B2IEC4
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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