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B2IE11 (B2IE11_BEII9) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length644 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B2IE11 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: A7697D1C985DA370

FASTA64472,115
        10         20         30         40         50         60 
MAALDTHHQK RAKASPFLDS LAIQGAKKAS LPEFVEPMLA SLLTAPPAGK DWIHEIKFDG 

        70         80         90        100        110        120 
YRLQARIEAG RVKLLTRRGL DWTQKFGPKI VTILQALPVE TALIDGELVV ENSSGVSDFS 

       130        140        150        160        170        180 
ALQAALSEGQ FDRFLFYAFD LLYLDGYDLC DLSLSKRRDM LEHLVGSDAG PLRMSQRFEE 

       190        200        210        220        230        240 
EGRLVLQHAC RLGLEGIISK RKESVYRSGR GKDWIKSKCS ARQEFVIAGY VPSSTSRKAI 

       250        260        270        280        290        300 
GSLVLGVYDG DRLDYVGRVG TGFTMAIAED LFRKLEAMQI DKRPFAKPLA SAEARHVRYV 

       310        320        330        340        350        360 
HPELVAEIEF SGWTADERLR HASFQGLRED KDAREVVREG SRSLTFTAKP QRRRAVFTHS 

       370        380        390        400        410        420 
DRIYWPDEGV TKEGLADYYT EVWRFIAPFI VGRPLALLRC PDGITGPQFF QKHAWKKVYS 

       430        440        450        460        470        480 
HLVLVNDPKE KSEPLLALHD LDGLLELVQS AVLEIHPWQS TLTDWERPDR IIMDLDPGEG 

       490        500        510        520        530        540 
VPWEMVIAAA EEMRDRLQEV GLAAFVKTSG GKGLHVVSPL KPLATWPMVK TFTKTLADAM 

       550        560        570        580        590        600 
AADNPDRFIS TSTKSKRQGK IFIDYLRNQR GMTAVAAYST RARPGASVSV PLDWKELSPN 

       610        620        630        640 
IGPAYFTVEN TPIRLAALTG DPWAEFQAAA VALEEPRSTR RRHG 

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References

[1]"Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N. expand/collapse author list , Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9039 / DSM 1715 / NCIB 8712.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001016 Genomic DNA. Translation: ACB94035.1.
RefSeqYP_001831524.1. NC_010581.1.

3D structure databases

ProteinModelPortalB2IE11.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395963.Bind_0382.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB94035; ACB94035; Bind_0382.
GeneID6199130.
KEGGbid:Bind_0382.
PATRIC21083371. VBIBeiInd21058_0643.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAFEGMRID.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycBIND395963:GJA7-385-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2IE11_BEII9
AccessionPrimary (citable) accession number: B2IE11
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)