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B2IDQ5 (B2IDQ5_BEII9) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL ACB95494.1
EC=4.2.1.52 EMBL ACB95494.1
Gene names
Ordered Locus Names:Bind_1870
OrganismBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) [Complete proteome] [HAMAP]
Taxonomic identifier395963 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Beijerinckia

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Sequences

Sequence LengthMass (Da)Tools
B2IDQ5 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 787B74933FBE91C8

FASTA29731,513
        10         20         30         40         50         60 
MGMKAAFKGS ITALVTPFRA GKVDEQAFRA FVDWQILSGT HGLVPVGTTG ESPTLTHEEH 

        70         80         90        100        110        120 
RQVVSACISE AKGRVPVIAG AGSNNTEEAI ELARFAEKAG ADGLLIVTPY YNKPSQEGLY 

       130        140        150        160        170        180 
RHFKAVNDAV GIPIIIYNIP PRSVVDMSIE TMQRLFELKN IAGVKDATGN LARTALQRQA 

       190        200        210        220        230        240 
LGPDFIQLSG EDMTALAVNA LGGHGCISVT SNVAPRQCAD MQQASLDGDF AKALQVHDAL 

       250        260        270        280        290 
SHLHAALFVE PNPAGPKYAL SLLGKIEDEI RLPLVSASVN AQAVIRAAMV HAGLITE

« Hide

References

[1]"Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N. expand/collapse author list , Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9039 / DSM 1715 / NCIB 8712.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001016 Genomic DNA. Translation: ACB95494.1.
RefSeqYP_001832983.1. NC_010581.1.

3D structure databases

ProteinModelPortalB2IDQ5.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2IDQ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6199279.
GenomeReviewsGene locus Bind_1870 in contig CP001016_GR.
KEGGbid:Bind_1870.
PATRIC21086599. VBIBeiInd21058_2233.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMAHGCISVV.
ProtClustDBCLSK2405593.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2IDQ5_BEII9
AccessionPrimary (citable) accession number: B2IDQ5
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info