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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei163 – 1631UniRule annotation
Active sitei594 – 5941UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciBIND395963:GJA7-139-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Bind_0138Imported
OrganismiBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)Imported
Taxonomic identifieri395963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBeijerinckiaceaeBeijerinckia
ProteomesiUP000001695: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi395963.Bind_0138.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2IBS4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTKGARTDI MTNLARQADD RLNEEIRLLG QILGETIREQ EGDESFDRIE
60 70 80 90 100
TIRRLSVAFE RGADAAAGET LDTLLRGLSA EQAVSVIRSF SYFSHLANIA
110 120 130 140 150
EDHETIRRSI AETGTEEPAG QETDSADDDF DGGMARLTAA GVDKARIIEA
160 170 180 190 200
LRQSFLSPVL TAHPTEVQRK SQLDAEHAIF SLLVEREHLG PGAARRRNDA
210 220 230 240 250
LLAACITQAW QTRLLRNAKL TVRDEIENAL SYYQTTFLRQ LPALYAELEE
260 270 280 290 300
WLGVRDLPCF LRMGSWIGGD RDGNPNVNAE TLDIALRRQA EVALRHYLSE
310 320 330 340 350
VRALGNELSL SRLLVGCSQD LLRLAETSGD DSPHRADEPY RRALIAIKGR
360 370 380 390 400
LAATLKELTG QEDSKPAPLG TQAYPDASAL LADLAIIEKS LAENHGRALI
410 420 430 440 450
GPRLAPFQRA VKVFGFHLAT VDLRQSSDRH AETIGELLRV AKVVEDYDAL
460 470 480 490 500
DEKARQDLLM RLLQDPRLLH VPYLRYSART EEELAVFETA RRLRRSHGPL
510 520 530 540 550
AIRQYIISHT ETVSDLLEVL LLQKECGLIE GLIGDPEQKP RAELMVVPLF
560 570 580 590 600
ETIEDLRNAQ GIMADFFALP GMADLVRASG GVQEIMLGYS DSNKDGGFFT
610 620 630 640 650
SNWELYRVSI ALAGFFAAQE GIVLRLFHGR GGTIGRGGGP SHQAILAQPP
660 670 680 690 700
GTANGLIRLT EQGEVISSKY AQPEIGRRNL ETLVAANIEA TLLGGDEAPP
710 720 730 740 750
EAFLEAAHFL SEASTKAYRG LVYDLPGFVD YFYAATPIAE IADLNIGSRP
760 770 780 790 800
ASRKSSRKIE DLRAIPWSFS WGQARVSLPG WFGFGTAVEA FLNDAPEEKL
810 820 830 840 850
ALLQRMAREW PFFHALLSNM DMVLAKADRK LARRYAALVP DQALAERIFG
860 870 880 890 900
IIDTEWTRTL HALDEITGVH ERLADNPALA HSISRRFPYI APLNHLQVEL
910 920 930
LRRWRLGKTD ARTYNGILIS INGIAAGLRN SG
Length:932
Mass (Da):103,141
Last modified:June 10, 2008 - v1
Checksum:iC7A9403A0E6B6EA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001016 Genomic DNA. Translation: ACB93796.1.
RefSeqiWP_012383154.1. NC_010581.1.
YP_001831285.1. NC_010581.1.

Genome annotation databases

EnsemblBacteriaiACB93796; ACB93796; Bind_0138.
GeneIDi6198215.
KEGGibid:Bind_0138.
PATRICi21082837. VBIBeiInd21058_0377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001016 Genomic DNA. Translation: ACB93796.1.
RefSeqiWP_012383154.1. NC_010581.1.
YP_001831285.1. NC_010581.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395963.Bind_0138.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB93796; ACB93796; Bind_0138.
GeneIDi6198215.
KEGGibid:Bind_0138.
PATRICi21082837. VBIBeiInd21058_0377.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciBIND395963:GJA7-139-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N.
    , Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 9039 / DSM 1715 / NCIB 8712Imported.

Entry informationi

Entry nameiB2IBS4_BEII9
AccessioniPrimary (citable) accession number: B2IBS4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: February 4, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.