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Protein
Submitted name:

Superoxide dismutase copper/zinc binding

Gene

Bind_1561

Organism
Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBIND395963:GJA7-1583-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc bindingImported
Gene namesi
Ordered Locus Names:Bind_1561Imported
OrganismiBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)Imported
Taxonomic identifieri395963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBeijerinckiaceaeBeijerinckia
ProteomesiUP000001695 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PotentialImportedAdd
BLAST
Chaini21 – 172152 PotentialImportedPRO_5000343381Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi395963.Bind_1561.

Structurei

3D structure databases

ProteinModelPortaliB2IBA9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiVHENPDD.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B2IBA9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGLLIAASL ILAGPMALAA PAEYSSVIKG ADGAELGTVD LKEGPLGVLV
60 70 80 90 100
HFDLHGLKPG WHGVHFHAKG DCSDPKFLNS GAHVEAEGEK LAHGFLNPQG
110 120 130 140 150
THAADLPNVF AAADGTVHAD TFSTFVSLHG EKQRPALLGG AGTALVVHEN
160 170
PDDYTNPPIG GAGARIACAV LK
Length:172
Mass (Da):17,607
Last modified:June 10, 2008 - v1
Checksum:i3EECDA50CC55516A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001016 Genomic DNA. Translation: ACB95193.1.
RefSeqiYP_001832682.1. NC_010581.1.

Genome annotation databases

EnsemblBacteriaiACB95193; ACB95193; Bind_1561.
KEGGibid:Bind_1561.
PATRICi21085939. VBIBeiInd21058_1908.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001016 Genomic DNA. Translation: ACB95193.1.
RefSeqiYP_001832682.1. NC_010581.1.

3D structure databases

ProteinModelPortaliB2IBA9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395963.Bind_1561.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB95193; ACB95193; Bind_1561.
KEGGibid:Bind_1561.
PATRICi21085939. VBIBeiInd21058_1908.

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiVHENPDD.
OrthoDBiEOG6K13RS.

Enzyme and pathway databases

BioCyciBIND395963:GJA7-1583-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N.
    , Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 9039 / DSM 1715 / NCIB 8712Imported.

Entry informationi

Entry nameiB2IBA9_BEII9
AccessioniPrimary (citable) accession number: B2IBA9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: April 29, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.