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B2I975 (B2I975_XYLF2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-galactosidase EMBL ACB93332.1
EC=3.2.1.23 EMBL ACB93332.1
Gene names
Ordered Locus Names:XfasM23_1933
OrganismXylella fastidiosa (strain M23) [Complete proteome] [HAMAP] EMBL ACB93332.1
Taxonomic identifier405441 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length612 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACB93332.1
   Molecular functionGlycosidase EMBL ACB93332.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ACB93332.1
Chain24 – 612589 Potential EMBL ACB93332.1
PRO_5000343265

Sequences

Sequence LengthMass (Da)Tools
B2I975 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 2B66663591EB556B

FASTA61267,992
        10         20         30         40         50         60 
MLRHLLTLSL IFAIVLPIGV SAAPWPAFST RGTQFIRDGR PYQLISGAIH FQRIPRAYWK 

        70         80         90        100        110        120 
DRLQKARAMG LNTVETYVFW NLVELREGQF DFTGNNDIGA FVREAASQGL NVILRPGPYV 

       130        140        150        160        170        180 
CAEWEAGGFP AWLFADPTLR VRSQDPRFLD ASQRYLEALG TQVRPLLNGN GGPIIAVQVE 

       190        200        210        220        230        240 
NEYGSYGDDH GYLQAVRALF IKAGLGGALL FTADGAQMLG NGTLPDVLAA VNVAPGEAKQ 

       250        260        270        280        290        300 
ALDKLATFHP GQPQLVGEYW AGWFDQWGKP HAQTDAKQQA DEIEWMLRQG HSINLYMFVG 

       310        320        330        340        350        360 
GTSFGFMNGA NFQGGPSDHY SPQTTSYDYD AVLDEAGRPM PKFALFRDVI TRVTGLQPPP 

       370        380        390        400        410        420 
LPAASRFIDL PDTPLRASAS LWDNLPAAVA TTADPQPMER YGQAYGYILY RTTLHGPRKG 

       430        440        450        460        470        480 
RLYLGEVRDD AHVYVDRLFV GRAERRRQQV WVEVDIPSGT HCLDVLVENS GRVNYGPHLA 

       490        500        510        520        530        540 
DGRAGLIGPV MLNHERVNNW ETFLLPLQTP EAIHGWTTAP MQGPAFHRGT LFIRTPGDTF 

       550        560        570        580        590        600 
LDMEAFSKGV TWANGHMLGR YWDIGPQRAL YFPGAWQRQG ENTVLVFDVS DTAAAQVRGV 

       610 
QQQRWITPRT AK

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References

[1]"Whole genome sequences of two Xylella fastidiosa strains (M12 and M23) causing almond leaf scorch disease in California."
Chen J., Xie G., Han S., Chertkov O., Sims D., Civerolo E.L.
J. Bacteriol. 192:4534-4534(2010) [PubMed: 20601474] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001011 Genomic DNA. Translation: ACB93332.1.
RefSeqYP_001830606.1. NC_010577.1.

3D structure databases

ProteinModelPortalB2I975.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2I975.

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6203250.
GenomeReviewsGene locus XfasM23_1933 in contig CP001011_GR.
KEGGxfn:XfasM23_1933.
PATRIC24146488. VBIXylFas85937_2405.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG292753.
OMAENMGRVS.
ProtClustDBCLSK881272.

Family and domain databases

InterProIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2I975_XYLF2
AccessionPrimary (citable) accession number: B2I975
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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