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B2HQF7 (B2HQF7_MYCMM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribonuclease RphA EMBL ACC42449.1
Gene names
Name:rphA EMBL ACC42449.1
Ordered Locus Names:MMAR_4042
OrganismMycobacterium marinum (strain ATCC BAA-535 / M) [Complete proteome] [HAMAP]
Taxonomic identifier216594 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length276 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. SAAS SAAS018336

Catalytic activity

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. SAAS SAAS018336

Sequences

Sequence LengthMass (Da)Tools
B2HQF7 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 445068DCB8340934

FASTA27628,832
        10         20         30         40         50         60 
MSGALGLVSV GRARVGVVSK REDGRRDDEL RPVVITRGFT ENPAGSVLIE FGRTKVMCTA 

        70         80         90        100        110        120 
SVTEGVPRWR KGSGLGWLTA EYAMLPSATH TRSDRESVKG RVGGRTQEIS RLVGRSLRAC 

       130        140        150        160        170        180 
IDLAALGENT IAVDCDVLQA DGGTRTAAIT GAYVALADAV NYLAAAGKLS DPRPLSCAIA 

       190        200        210        220        230        240 
AVSVGVVDGR VRVDLPYEED SRAEVDMNVV ATDTGTLVEV QGTGEGATFP RSTLDKLLDM 

       250        260        270 
ALGACDTLFA AQRDALALPY PGVLPEGPPP SKAFGS

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000854 Genomic DNA. Translation: ACC42449.1.
RefSeqYP_001852304.1. NC_010612.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB2HQF7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000033411; EBMYCP00000031851; EBMYCG00000033406.
GeneID6228318.
GenomeReviewsGene locus MMAR_4042 in contig CP000854_GR.
KEGGmmi:MMAR_4042.
PATRIC18069323. VBIMycMar75906_4332.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000017525.
HOGENOMHBG737187.
OMAMLPRATG.
ProtClustDBPRK00173.

Family and domain databases

HAMAPMF_00564. RNase_PH.
[Tree]
InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
KOK00989.
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMSSF55666. 3_ExoRNase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMsTIGR01966. RNasePH. 1 hit.
PROSITEPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2HQF7_MYCMM
AccessionPrimary (citable) accession number: B2HQF7
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info