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B2HNG9 (B2HNG9_MYCMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MMAR_3812 EMBL ACC42222.1
OrganismMycobacterium marinum (strain ATCC BAA-535 / M) [Complete proteome] [HAMAP] EMBL ACC42222.1
Taxonomic identifier216594 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Removes damaged bases from DNA, leaving an abasic site. SAAS SAAS012319

The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate. SAAS SAAS012319

Cofactor

Binds 1 zinc ion per subunit By similarity. SAAS SAAS012319

Sequence similarities

Contains FPG-type zinc finger. SAAS SAAS012319

Sequences

Sequence LengthMass (Da)Tools
B2HNG9 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 8F0DB320AE2A3764

FASTA26829,203
        10         20         30         40         50         60 
MPEGHTLHRL ARLHQRRFAG APVVVSSPQG KFADSAGAVD GRVLRAASAW GKHLFHHYAG 

        70         80         90        100        110        120 
GPVVHVHLGL YGAFTEWARS AGELLPDPVG QVRMRMVGAE YGTDLRGPTV CEVIDDAQVA 

       130        140        150        160        170        180 
DVLARLGPDP LRKDADPSWA WARIAKSRRP IGALLMDQKV MAGVGNVYRS ELLFRHRIDP 

       190        200        210        220        230        240 
YRSGQRITEA EFSAAWTDLV ALMKVGLRGG KIVVVRPEHD HGAPSYAAGR PRTYVYRRAG 

       250        260 
DPCRVCGATV GTAVLEGRNV FWCPSCQA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000854 Genomic DNA. Translation: ACC42222.1.
RefSeqYP_001852077.1. NC_010612.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING216594.MMAR_3812.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACC42222; ACC42222; MMAR_3812.
GeneID6228086.
KEGGmmi:MMAR_3812.
PATRIC18068817. VBIMycMar75906_4083.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0266.
HOGENOMHOG000020880.
KOK05522.
OMANVYRAEV.
OrthoDBEOG6QP131.

Enzyme and pathway databases

BioCycMMAR216594:GJOB-3837-MONOMER.

Family and domain databases

InterProIPR015886. DNA_glyclase/AP_lyase_DNA-bd.
IPR015887. DNA_glyclase_Znf_dom_DNA_BS.
IPR012319. DNA_glycosylase/AP_lyase_cat.
IPR010979. Ribosomal_S13-like_H2TH.
IPR000214. Znf_DNA_glyclase/AP_lyase.
IPR010663. Znf_DNA_glyclase/IsotRNA_synth.
[Graphical view]
PfamPF01149. Fapy_DNA_glyco. 1 hit.
PF06831. H2TH. 1 hit.
PF06827. zf-FPG_IleRS. 1 hit.
[Graphical view]
SMARTSM00898. Fapy_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMSSF46946. SSF46946. 1 hit.
SSF81624. SSF81624. 1 hit.
PROSITEPS01242. ZF_FPG_1. 1 hit.
PS51066. ZF_FPG_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2HNG9_MYCMM
AccessionPrimary (citable) accession number: B2HNG9
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)