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Protein
Submitted name:

Tubulin folding cofactor C

Gene

Tbcc

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi253 – 256GTPUniRule annotation4

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandGTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Tubulin folding cofactor CImported
Submitted name:
Tubulin-specific chaperone c (Predicted)Imported
Gene namesi
Name:TbccImported
Synonyms:Tbcc_predictedImported
ORF Names:rCG_43480Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 9

Organism-specific databases

RGDi1306756 Tbcc

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiB2GUZ7

Expressioni

Gene expression databases

BgeeiENSRNOG00000048291

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065504

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini163 – 317C-CAP/cofactor C-likeInterPro annotationAdd BLAST155

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 54Sequence analysisAdd BLAST25
Coiled coili73 – 100Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2512 Eukaryota
ENOG410Y28B LUCA
GeneTreeiENSGT00530000063741
HOVERGENiHBG017893
KOiK21766
OMAiCQQLRLH
OrthoDBiEOG091G0K00

Family and domain databases

Gene3Di1.20.58.1250, 1 hit
2.160.20.70, 1 hit
InterProiView protein in InterPro
IPR017901 C-CAP_CF_C-like
IPR016098 CAP/MinC_C
IPR006599 CARP_motif
IPR027684 TBCC
IPR031925 TBCC_N
IPR038397 TBCC_N_sf
IPR012945 Tubulin-bd_cofactor_C_dom
PANTHERiPTHR15139 PTHR15139, 1 hit
PfamiView protein in Pfam
PF07986 TBCC, 1 hit
PF16752 TBCC_N, 1 hit
PIRSFiPIRSF037947 Protein_XRP2_, 1 hit
SMARTiView protein in SMART
SM00673 CARP, 2 hits
PROSITEiView protein in PROSITE
PS51329 C_CAP_COFACTOR_C, 1 hit

Sequencei

Sequence statusi: Complete.

B2GUZ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGVDCSVAL ADAAAGSPRD LSLVPERLQR REQERQMEVE RRKQKRQDQE
60 70 80 90 100
VEEEKSGFFA AAFARERAAA EELLQGEASA ERLEEAANRL QALRKLLNDS
110 120 130 140 150
VLFLAAYDLR QGQAALAQLQ SVLTERRQEL QPKKRFAFKA RKKDAAGTAQ
160 170 180 190 200
VDAAPVTSAA PSPPLTEEEG APGASWACGF SNLESQDLEK RAEELHQRDI
210 220 230 240 250
LLSDLTNCTV RLRGNPNTLR LAKARGCKVL CGPVTTSVFL EDCRDCILAV
260 270 280 290 300
ACQQLRVHTT KDTRIFLQVT SRAIVEDCSG IQFAPYTWSY PGIDKDFQDS
310 320 330 340
GLDRSKNNWN QVDDFNWLAQ NVPSPNWSIL PEEDRDIQWD
Length:340
Mass (Da):38,077
Last modified:June 10, 2008 - v1
Checksum:iEF7B3701057E39E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07066798 Genomic DNA No translation available.
BC166467 mRNA Translation: AAI66467.1
CH473987 Genomic DNA Translation: EDM18866.1
RefSeqiNP_001101670.1, NM_001108200.2
UniGeneiRn.18774

Genome annotation databases

EnsembliENSRNOT00000073079; ENSRNOP00000065504; ENSRNOG00000048291
GeneIDi316221
KEGGirno:316221
UCSCiRGD:1306756 rat

Similar proteinsi

Entry informationi

Entry nameiB2GUZ7_RAT
AccessioniPrimary (citable) accession number: B2GUZ7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 23, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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