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Protein
Submitted name:

Hdac11 protein

Gene

Hdac11

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • oligodendrocyte development Source: RGD
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Enzyme and pathway databases

BRENDAi3.5.1.98. 5301.

Names & Taxonomyi

Protein namesi
Submitted name:
Hdac11 proteinImported
Submitted name:
Histone deacetylase 11 (Predicted), isoform CRA_aImported
Submitted name:
Protein Hdac11Imported
Gene namesi
Name:Hdac11Imported
Synonyms:Hdac11_predictedImported
ORF Names:rCG_56042Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1311706. Hdac11.

Subcellular locationi

GO - Cellular componenti

  • extracellular exosome Source: Ensembl
  • histone deacetylase complex Source: Ensembl
  • nucleus Source: RGD
  • plasma membrane Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSRNOG00000006824.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008962.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 315Hist_deacetylInterPro annotationAdd BLAST281

Phylogenomic databases

eggNOGiKOG1344. Eukaryota.
COG0123. LUCA.
GeneTreeiENSGT00390000003411.
HOGENOMiHOG000280018.
HOVERGENiHBG051893.
KOiK11418.
OMAiFEQEPFR.
OrthoDBiEOG091G0EQP.
TreeFamiTF106176.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.

Sequencei

Sequence statusi: Complete.

B2GUW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPHATQLYQH VPEKRWPIVY SPRYNITFMG LEKLHPFDAG KWGKVINFLK
60 70 80 90 100
EEKLLSDGML VEAREASEED LLVVHTRRYL NELKWSFVVA TITEIPPVIF
110 120 130 140 150
LPNFLVQRKV LRPLRTQTGG TIMAGKLAVE RGWAINVGGG FHHCSSDRGG
160 170 180 190 200
GFCAYADITL AIKFLFERVE GISRATIIDL DAHQGNGHER DFMGDKRVYI
210 220 230 240 250
MDVYNRHIYP GDRFAKEAIR RKVELEWGTE DEEYLEKVER NVRRSLQEHL
260 270 280 290 300
PDVVVYNAGT DVLEGDRLGG LSISPAGIVK RDEVVFRVVR AHDIPILMVT
310 320 330 340
SGGYQKRTAR IIADSILNLH DLGLIGPEFP YVPARNSSIP LLSRAVP
Length:347
Mass (Da):39,338
Last modified:June 10, 2008 - v1
Checksum:i6A1239019B1A7841
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07061420 Genomic DNA. No translation available.
BC166430 mRNA. Translation: AAI66430.1.
CH473957 Genomic DNA. Translation: EDL91359.1.
RefSeqiNP_001100080.2. NM_001106610.2.
UniGeneiRn.28065.

Genome annotation databases

EnsembliENSRNOT00000008962; ENSRNOP00000008962; ENSRNOG00000006824.
GeneIDi297453.
KEGGirno:297453.
UCSCiRGD:1311706. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07061420 Genomic DNA. No translation available.
BC166430 mRNA. Translation: AAI66430.1.
CH473957 Genomic DNA. Translation: EDL91359.1.
RefSeqiNP_001100080.2. NM_001106610.2.
UniGeneiRn.28065.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008962.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000008962; ENSRNOP00000008962; ENSRNOG00000006824.
GeneIDi297453.
KEGGirno:297453.
UCSCiRGD:1311706. rat.

Organism-specific databases

CTDi79885.
RGDi1311706. Hdac11.

Phylogenomic databases

eggNOGiKOG1344. Eukaryota.
COG0123. LUCA.
GeneTreeiENSGT00390000003411.
HOGENOMiHOG000280018.
HOVERGENiHBG051893.
KOiK11418.
OMAiFEQEPFR.
OrthoDBiEOG091G0EQP.
TreeFamiTF106176.

Enzyme and pathway databases

BRENDAi3.5.1.98. 5301.

Gene expression databases

BgeeiENSRNOG00000006824.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
ProtoNetiSearch...

Entry informationi

Entry nameiB2GUW3_RAT
AccessioniPrimary (citable) accession number: B2GUW3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: November 30, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.