B2GLV1 (B2GLV1_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL BAG29292.1
EC=1.2.4.2 EMBL BAG29292.1

Gene names

Name:	sucA EMBL BAG29292.1
Ordered Locus Names:	KRH_09450

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria

Protein attributes

Sequence length	1274 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL BAG29292.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GLV1 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 2F6D90EED8D9221B	FASTA	1,274	140,131
	10 20 30 40 50 60 MPDQPHHLIP EEFAGNEWLV DELFEKYQAD KNSVDKKWWP IFEQMAAEDG TPAPETARER 70 80 90 100 110 120 PAASTTPAPA ARKSSAPAAA KTPQKADRAQ SPAPAATGAK AKGRPEGVDT EADSPEGSAT 130 140 150 160 170 180 KRPIRAQPED RKEDTPAKAP EKPAEDKVVK LRGPAKAVAA NMDASLSVPT ATTVRAVPAK 190 200 210 220 230 240 LLIDNRMVIN SHLARNRGGK VSFTHLVGYA VIRALSSFPS MNVVYDESDG KPAAIHPAHV 250 260 270 280 290 300 NFGIAIDIPN KDGSRNLVVP NIKGAETMSF QEFWTSYEDI VKRGRNGALT MEDYSGTTVS 310 320 330 340 350 360 LTNPGGIGTV HSVPRLSKGQ ACIIGVGALD YPAEYKGASP RTIARNAVSK VITLTSTYDH 370 380 390 400 410 420 RVIQGAGSGE FLKLVEHYLL GGDDFYDHIF EALRIPYEPV RWAVDNQVNP EIQINKVARI 430 440 450 460 470 480 QQLIHSYRVR GHLMADTNPL EYVMRKHPDL DIRTYGLTLW DLEREWPTGG FGGQNLLTLR 490 500 510 520 530 540 VILGRLRDAY CRTVGVEYMH IQEPEQREWF QSKLERDYQK PSREEQFHIL ERLNAAEAFE 550 560 570 580 590 600 TFLQTKYVGQ KRFSLEGGES LIPLLDAIMS EAADASLAGV GIAMAHRGRL NVLTNIAGKS 610 620 630 640 650 660 YAQVFREFEG SQDPRAAEGS GDVKYHLGTE GVFTSDNGNE TQVYLAANPS HLEAADPVIE 670 680 690 700 710 720 GIARAKTDVL GAGPEGDGEF PVLPIQVHGD AAMAGQGIVY EVMQMSGLEG YTVGGTIHVV 730 740 750 760 770 780 VNNQVGFTTA PSAGRTSTYS TDVARTVQAP IFHVNADDPE AVTRVAQLAF EYRQRFHHDV 790 800 810 820 830 840 VIDLVCYRRR GHNEGDDPSM TQPLMYSLID GKRSTRKVYT ENLVGRGDIT QEEADRALKD 850 860 870 880 890 900 YQERLERVFA ETHEAQTSTV PLVTGDAAAI ANIERPSAQQ ADSGVSVPKS TAISPETAQR 910 920 930 940 950 960 IGDAYVQMPE GFTMHRKLKK LAEKRRDMTR EGGIDWGMGE LMAFGSVLMD GVPVRMSGQD 970 980 990 1000 1010 1020 VRRGTFTQRQ AVFFDAENGA EWTPLNNLSA DQAHFSIYNS LLSEYGVLGF EYGYSVERPE 1030 1040 1050 1060 1070 1080 ALTVWEAQFG DFTNGAQTIV DEFISSAEQK WGQRSNLVLL LPHGFEGQGP DHSSARIERF 1090 1100 1110 1120 1130 1140 LTLCAEKNMI VAQPSTPANH FHLLRRQAYS RPRRPLIVAT PKQLLRLKAA ASPVEEFTQG 1150 1160 1170 1180 1190 1200 GFQTVIPDTA GLDDAKVTDV ILVSGRLYYD LVTQRKNSDD HSTAIVRVEQ LYPLPVDEIK 1210 1220 1230 1240 1250 1260 EQLARYPEAR ILWAQDEPAN QGAWPFMAVN LVPQLDRPVT LASRPASASP ANGSAKRHAA 1270 ELETLVQQAF DRGE

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed: 18408034] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG29292.1.
RefSeq	YP_001854798.1. NC_010617.1.
3D structure databases
ProteinModelPortal	B2GLV1.
ModBase	Search...
Protein-protein interaction databases
STRING	B2GLV1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6238258.
GenomeReviews	Gene locus KRH_09450 in contig AP009152_GR.
KEGG	krh:KRH_09450.
PATRIC	22182098. VBIKocRhi5258_0917.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289950.
OMA	KYENICE.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2GLV1_KOCRD

Accession

Primary (citable) accession number: B2GLV1

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)