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Protein

Glutamate-1-semialdehyde 2,1-aminomutase

Gene

hemL

Organism
Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

(S)-4-amino-5-oxopentanoate = 5-aminolevulinate.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

Pathwayi: protoporphyrin-IX biosynthesis

This protein is involved in step 2 of the subpathway that synthesizes 5-aminolevulinate from L-glutamyl-tRNA(Glu).UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:
  1. Glutamyl-tRNA reductase (hemA)
  2. Glutamate-1-semialdehyde 2,1-aminomutase (hemL)
This subpathway is part of the pathway protoporphyrin-IX biosynthesis, which is itself part of Porphyrin-containing compound metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes 5-aminolevulinate from L-glutamyl-tRNA(Glu), the pathway protoporphyrin-IX biosynthesis and in Porphyrin-containing compound metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processPorphyrin biosynthesis
LigandPyridoxal phosphate

Enzyme and pathway databases

BioCyciKRHI378753:G1G2M-852-MONOMER
UniPathwayiUPA00251; UER00317

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate-1-semialdehyde 2,1-aminomutaseUniRule annotation (EC:5.4.3.8UniRule annotation)
Short name:
GSAUniRule annotation
Alternative name(s):
Glutamate-1-semialdehyde aminotransferaseUniRule annotation
Short name:
GSA-ATUniRule annotation
Gene namesi
Name:hemLUniRule annotation
Ordered Locus Names:KRH_08560
OrganismiKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)
Taxonomic identifieri378753 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeKocuria
Proteomesi
  • UP000008838 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001218991 – 439Glutamate-1-semialdehyde 2,1-aminomutaseAdd BLAST439

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei270N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi378753.KRH_08560

Structurei

3D structure databases

ProteinModelPortaliB2GL27
SMRiB2GL27
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CDM Bacteria
COG0001 LUCA
HOGENOMiHOG000020210
KOiK01845
OMAiWGPLIFG
OrthoDBiPOG091H04O1

Family and domain databases

CDDicd00610 OAT_like, 1 hit
Gene3Di3.40.640.10, 1 hit
3.90.1150.10, 2 hits
HAMAPiMF_00375 HemL_aminotrans_3, 1 hit
InterProiView protein in InterPro
IPR004639 4pyrrol_synth_GluAld_NH2Trfase
IPR005814 Aminotrans_3
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00202 Aminotran_3, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR00713 hemL, 1 hit

Sequencei

Sequence statusi: Complete.

B2GL27-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVSQELFDR ARRVMPGGVN SPVRAFNSVG GTPPFIAAAK GPYLTDVDGR
60 70 80 90 100
EYVDLVCSWG PALIGHAHPV VTEAVHEAVE RGLGFGATTR GETELAELVV
110 120 130 140 150
DRVAPLEEIR MVSTGTEATM TALRLARGYT GRDLVVKFAG CYHGHVDSLL
160 170 180 190 200
SEAGSGLATL ALPGSAGVTE ATAAQTLVLP YNDVAALEAA FAEHPGRIAA
210 220 230 240 250
VITEAAPCNM GVVTPQDGFN AAIRRITQAD GALMILDEVL TGFRVHEAGY
260 270 280 290 300
WGLSNAAGES WAPDLFTFGK VIGGGLPTAA LGGRREVMEY LAPTGPVYQA
310 320 330 340 350
GTLSGNPVAM AAGLATLKCA DAVAYQTIDR RSEQLRAGLR EALDAAGVDY
360 370 380 390 400
SIQEVGSLFS LAFGTRSTGV HDYADAKGQE AFRYTPFFHA MLDAGVYLPP
410 420 430
SVFEAWFLSA AHDDSAMDRI LSALPAAARA AAEAQPPQP
Length:439
Mass (Da):45,950
Last modified:June 10, 2008 - v1
Checksum:i9D0E89A826ADDC97
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009152 Genomic DNA Translation: BAG29203.1
RefSeqiWP_012397924.1, NC_010617.1

Genome annotation databases

EnsemblBacteriaiBAG29203; BAG29203; KRH_08560
GeneIDi35827036
KEGGikrh:KRH_08560

Similar proteinsi

Entry informationi

Entry nameiGSA_KOCRD
AccessioniPrimary (citable) accession number: B2GL27
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: June 10, 2008
Last modified: April 25, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health