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B2GKE9 (B2GKE9_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phenylalanine--tRNA ligase alpha chain HAMAP MF_00281
EC=6.1.1.20 HAMAP MF_00281
Alternative name(s):
Phenylalanyl-tRNA synthetase alpha chain HAMAP MF_00281
Gene names
Name:pheS HAMAP MF_00281 EMBL BAG29908.1
Ordered Locus Names:KRH_15610
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe). HAMAP MF_00281

Cofactor

Binds 2 magnesium ions per tetramer By similarity. HAMAP MF_00281

Subunit structure

Tetramer of two alpha and two beta chains By similarity. HAMAP MF_00281

Subcellular location

Cytoplasm By similarity HAMAP MF_00281.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily. HAMAP MF_00281

Sequences

Sequence LengthMass (Da)Tools
B2GKE9 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: D9A064626701A232

FASTA35238,772
        10         20         30         40         50         60 
MSETTPSAAV DPTDEAAVTA AAEDALSAIR AAADLPELKS VRLAHAGEKS PLALANRAIG 

        70         80         90        100        110        120 
GLDKTAKATA GKLVGQARGR VNKAVAARTA ELEEERDARI LVEEAVDVTA ATRRRRLGGR 

       130        140        150        160        170        180 
HPLNNLMDRI GDIFVGMGWE IAEGPELEHE WFNFDSLNFK PDHPARQLQD TFFVDPPSSH 

       190        200        210        220        230        240 
LVLRTHTSPV QMRSLLEREL PVYVVCPGKT YRTDELDATH TPVFHQVEGI AVDEGLSMAD 

       250        260        270        280        290        300 
LKGTLTHFAR TMFGPEAAIR LRPNYFPFTE PSAELDVWHP TAKGGPRWIE WGGCGMMHPN 

       310        320        330        340        350 
VLRAAGIDPE RYSGFAFGMG IERTLMFRNN VPDMHDMVEG DVRFSEHFGM EI

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References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed: 18408034] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009152 Genomic DNA. Translation: BAG29908.1.
RefSeqYP_001855414.1. NC_010617.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB2GKE9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6239709.
GenomeReviewsGene locus KRH_15610 in contig AP009152_GR.
KEGGkrh:KRH_15610.
PATRIC22183418. VBIKocRhi5258_1556.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG284353.
OMAFRASYFP.
ProtClustDBPRK00488.

Family and domain databases

HAMAPMF_00281. Phe_tRNA_synth_alpha1.
[Tree]
InterProIPR006195. aa-tRNA-synth_II.
IPR004529. Phe-tRNA-synth_IIc_asu.
IPR004188. Phe-tRNA_synth_II_N.
IPR022911. Phe_tRNA_synth_alpha1_bac.
IPR002319. Phenylalanyl-tRNA_Synthase.
IPR010978. tRNA-bd_arm.
[Graphical view]
KOK01889.
PfamPF02912. Phe_tRNA-synt_N. 1 hit.
PF01409. tRNA-synt_2d. 1 hit.
[Graphical view]
SUPFAMSSF46589. tRNA_binding_arm. 1 hit.
TIGRFAMsTIGR00468. PheS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2GKE9_KOCRD
AccessionPrimary (citable) accession number: B2GKE9
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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