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B2GKA9 (B2GKA9_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625
Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625
Gene names
Name:selD HAMAP MF_00625 EMBL BAG29129.1
Ordered Locus Names:KRH_07820
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria

Protein attributes

Sequence length345 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625 SAAS SAAS023061

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625 SAAS SAAS023061

Cofactor

Magnesium By similarity. HAMAP MF_00625 SAAS SAAS023061

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding238 – 2447ATP By similarity HAMAP MF_00625

Sites

Active site291 By similarity HAMAP MF_00625
Site321Important for catalytic activity By similarity HAMAP MF_00625

Sequences

Sequence LengthMass (Da)Tools
B2GKA9 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: FCB66B7CD995CB40

FASTA34535,154
        10         20         30         40         50         60 
MSERTTDSPA QDPAAGLGRL TSYAHGGGCA CKIPPGELED AVRGLTGQNA PDVLVGLDDG 

        70         80         90        100        110        120 
DDAAAVLVRP DLAVVSTADF FTPVVDSAHD WGRIAAANAL SDVYAMGGTP VVAINLVGWP 

       130        140        150        160        170        180 
RELLPMELMS EVLQGGLDVA AQAGCPVIGG HSIDAPEPTY GMAVTGTADP QRLLRNDAAR 

       190        200        210        220        230        240 
PGLPITLTKP IGVGLLNNRH KATGEVFPAA IETMTALNRD ASRAALAAGV EAATDVTGFG 

       250        260        270        280        290        300 
LLGHLYKMCR ASGVGATIDA AAVPLVEGAA DALRDGFVSG GTRRNLDWVR PHLAAGSGVT 

       310        320        330        340 
EDTLLLLSDA QTSGGLLVVG EVPGYPVIGE TTALPETTDT LVTVR

« Hide

References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed: 18408034] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009152 Genomic DNA. Translation: BAG29129.1.
RefSeqYP_001854635.1. NC_010617.1.

3D structure databases

ProteinModelPortalB2GKA9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2GKA9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6238132.
GenomeReviewsGene locus KRH_07820 in contig AP009152_GR.
KEGGkrh:KRH_07820.
PATRIC22181772. VBIKocRhi5258_0756.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAGISANIW.
ProtClustDBCLSK924712.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2GKA9_KOCRD
AccessionPrimary (citable) accession number: B2GKA9
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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