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B2GJ58 (B2GJ58_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.1.1.- EMBL BAG29763.1
Gene names
Ordered Locus Names:KRH_14160
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeKocuria

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B2GJ58 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: CCAD6782A8A2C446

FASTA47851,301
        10         20         30         40         50         60 
MTQTPHTLEL RLGDVAHGGH VVARTDEGRV VFVRHGLPGE LVRVRLSDAQ PEASYWRGDA 

        70         80         90        100        110        120 
VEVLEPAAGR RGQHVWSQAD AALADSRGTA PVGGAEFGHV ELTLQRELKT RVLAEQLEHL 

       130        140        150        160        170        180 
AGHTWDGSVQ ATAHERADGT GWRTRLHLDV AADGRAGMHP HRSDELVAVT DMPLATDAIR 

       190        200        210        220        230        240 
ELAPWSLRLP GAERVDVAAP SNGLCALLHV SLRPDTSEPQ IDALRGELTQ WGEEHGVSVT 

       250        260        270        280        290        300 
ARSADHRRIA TWAGEPGVCE TLELPGLDGS GPRRLQWRVS PTGFWQIHRE APETLSRAVL 

       310        320        330        340        350        360 
EAARLEPGET VWDLYSGAGL FTAVAADAVG ERGRVFAVEG SPVTSADAAH NLAGAPHVTG 

       370        380        390        400        410        420 
VRGDVARVLT GRGGARRGDR RRGGGWAASS RDARTAAPPR PDAVIMDPPR AGAAKEVLAA 

       430        440        450        460        470 
VDQAGPRRIV YVACDPAALG RDLGRLRRRG WRIEDVSGFD LYPNTHHVEA VALLRRDA 

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References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009152 Genomic DNA. Translation: BAG29763.1.
RefSeqYP_001855269.1. NC_010617.1.

3D structure databases

ProteinModelPortalB2GJ58.
ModBaseSearch...

Protein-protein interaction databases

STRING378753.KRH_14160.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG29763; BAG29763; KRH_14160.
GeneID6239249.
KEGGkrh:KRH_14160.
PATRIC22183102. VBIKocRhi5258_1404.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2265.
HOGENOMHOG000029865.
KOK00599.
OMAIDRCLIA.

Enzyme and pathway databases

BioCycKRHI378753:GJ8F-1449-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012340. NA-bd_OB-fold.
IPR000682. PCMT.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase.
[Graphical view]
PfamPF01135. PCMT. 1 hit.
PF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50926. TRAM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2GJ58_KOCRD
AccessionPrimary (citable) accession number: B2GJ58
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)