B2GIJ7 (B2GIJ7_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Name:	gcvT EMBL BAG28946.1
Ordered Locus Names:	KRH_05990

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria

Protein attributes

Sequence length	381 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Methyltransferase EMBL BAG28946.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GIJ7 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: F3D9FF6052EBB7FC	FASTA	381	40,235
	10 20 30 40 50 60 MSERRTALHG AHERLGARFT DFGGWSMPVR YASDTAEHHA VRRGAGIFDL SHMGEVEVTG 70 80 90 100 110 120 PQAGAFLDHA LVGVLSGIGV GRAKYSVIVD EAGRVLDDLI TYRLGEERYL VVPNAGNQDT 130 140 150 160 170 180 VVEALQQRAE AFDVTVQDRG PETSLIAVQG PRALEVLRAT GLDPAEEVAG LKYYACAVAR 190 200 210 220 230 240 CGGVDVLAAR TGYTGEDGFE LYCANADAET LWNALLATAE ELGTEDAPVQ PAGLAARDSL 250 260 270 280 290 300 RLEAGMPLYG HELSTEITPV EAGLGKLVEV ALRKKDESGT RTVGHDALAA MLRSTPERTL 310 320 330 340 350 360 IGLEGLGRKP IRAGYTVLSG ERTIGEVTSG LPSPTLGKPV AMALVATDAL DEIAAGTVSV 370 380 QDARGRGVEV ARTAMPFYTR G

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed: 18408034] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG28946.1.
RefSeq	YP_001854452.1. NC_010617.1.
3D structure databases
ProteinModelPortal	B2GIJ7.
ModBase	Search...
Protein-protein interaction databases
STRING	B2GIJ7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6239433.
GenomeReviews	Gene locus KRH_05990 in contig AP009152_GR.
KEGG	krh:KRH_05990.
PATRIC	22181430. VBIKocRhi5258_0586.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG299834.
OMA	KALYGGM.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2GIJ7_KOCRD

Accession

Primary (citable) accession number: B2GIJ7

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)