B2GI93 (B2GI93_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
N utilization substance protein B homolog HAMAP-Rule MF_00073
Short name=Protein NusB HAMAP-Rule MF_00073

Gene names

Name:	nusB HAMAP-Rule MF_00073 EMBL BAG29685.1
Ordered Locus Names:	KRH_13380

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria › Kocuria rhizophila

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Involved in the transcription termination process By similarity. HAMAP-Rule MF_00073 SAAS SAAS011605
Sequence similarities	Belongs to the NusB family. HAMAP-Rule MF_00073

Ontologies

Keywords
Biological process	Transcription Transcription regulation Transcription termination HAMAP-Rule MF_00073 SAAS SAAS011605
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, termination Inferred from electronic annotation. Source: HAMAP regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GI93 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: BC7C8BAE3C27A964	FASTA	138	15,486
	10 20 30 40 50 60 MSGARSKARV RAVEILFEAE QRNESVRDAL VRRRENSSSP INPYTVEILE GVDERREDID 70 80 90 100 110 120 EFLETYSQGW ALGRMPAVDR NALRVGAWEL LYNSEIPDGV AVAEAVAVTR QLSTDDSPRF 130 VNGLLGRLQK VKPSLLDD

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG29685.1.
RefSeq	YP_001855191.1. NC_010617.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	378753.KRH_13380.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG29685; BAG29685; KRH_13380.
GeneID	6239774.
KEGG	krh:KRH_13380.
PATRIC	22182938. VBIKocRhi5258_1322.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0781.
HOGENOM	HOG000281867.
KO	K03625.
OMA	WELLYND.
ProtClustDB	CLSK959896.
Enzyme and pathway databases
BioCyc	KRHI378753:GJ8F-1371-MONOMER.
Family and domain databases
Gene3D	1.10.940.10. 1 hit.
HAMAP	MF_00073. NusB.
InterPro	IPR011605. NusB_fam. IPR006027. NusB_RsmB_TIM44. [Graphical view]
PANTHER	PTHR11078. PTHR11078. 1 hit.
Pfam	PF01029. NusB. 1 hit. [Graphical view]
SUPFAM	SSF48013. NusB_RsmB_TIM44. 1 hit.
TIGRFAMs	TIGR01951. nusB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2GI93_KOCRD

Accession

Primary (citable) accession number: B2GI93

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)