B2GHG8 (B2GHG8_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative TetR family transcriptional regulator EMBL BAG30444.1

Gene names

Ordered Locus Names:

KRH_20970

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria › Kocuria rhizophila

Protein attributes

Sequence length	428 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. SAAS SAAS001647

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS001647
Ligand	DNA-binding SAAS SAAS001647
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GHG8 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 0BD71F63150B1D30	FASTA	428	43,581
	10 20 30 40 50 60 MSEASAVTED VVTRSIRMLA DHGYMETTVE QLAQAAGISR ATFFRKYGSK EDVVFADHAA 70 80 90 100 110 120 TLERLEALLQ RPGLSPQDGL VEGAQLVFRH NLDHAQRAFA RHDLLQRVES LRDREIAMSS 130 140 150 160 170 180 RYERVFHAFL RAALPDSPDR RVTAVALPAA TVAVHNAFLR TWLRGPRPGQ GEQLAAALSR 190 200 210 220 230 240 RVVWLCALFG VIHQETAPSG SPVDLSFSSA QVSLELDDAA APPYAHGSPS PAGRPTANDA 250 260 270 280 290 300 ASSGAGAPGS WSPAGATAPA GTSSSSDASA GDAAAPPGAA PSGPSSSGGT PSSPDVSADD 310 320 330 340 350 360 DAATQEAAPS GPQLLRGTPS ALYAPAEDDA ATPEADPPGS SAGAPVGGGV DTARGRDVGA 370 380 390 400 410 420 DPDGSAAGPG EHGEPALANP RGGVVGGNRT DTVWVGGDAP IVVLVPRGGN PADVAERTAR SVYEALRG

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG30444.1.
RefSeq	YP_001855950.1. NC_010617.1.
3D structure databases
ProteinModelPortal	B2GHG8.
ModBase	Search...
Protein-protein interaction databases
STRING	378753.KRH_20970.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG30444; BAG30444; KRH_20970.
GeneID	6239389.
KEGG	krh:KRH_20970.
PATRIC	22184560. VBIKocRhi5258_2110.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG116599.
Enzyme and pathway databases
BioCyc	KRHI378753:GJ8F-2154-MONOMER.
Family and domain databases
Gene3D	1.10.10.60. 1 hit. 1.10.357.10. 1 hit.
InterPro	IPR009057. Homeodomain-like. IPR001647. HTH_TetR. IPR015893. Tet_transcr_reg_TetR-like_C. [Graphical view]
Pfam	PF00440. TetR_N. 1 hit. [Graphical view]
PRINTS	PR00455. HTHTETR.
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS50977. HTH_TETR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2GHG8_KOCRD

Accession

Primary (citable) accession number: B2GHG8

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)