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Protein
Submitted name:

Putative TetR family transcriptional regulator

Gene

KRH_20970

Organism
Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi28 – 47H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciKRHI378753:G1G2M-2110-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative TetR family transcriptional regulatorImported
Gene namesi
Ordered Locus Names:KRH_20970Imported
OrganismiKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)Imported
Taxonomic identifieri378753 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeKocuria
Proteomesi
  • UP000008838 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi378753.KRH_20970

Structurei

3D structure databases

ProteinModelPortaliB2GHG8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 65HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108Z78 Bacteria
ENOG4111XY0 LUCA
OrthoDBiPOG091H02BD

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
PfamiView protein in Pfam
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

B2GHG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEASAVTED VVTRSIRMLA DHGYMETTVE QLAQAAGISR ATFFRKYGSK
60 70 80 90 100
EDVVFADHAA TLERLEALLQ RPGLSPQDGL VEGAQLVFRH NLDHAQRAFA
110 120 130 140 150
RHDLLQRVES LRDREIAMSS RYERVFHAFL RAALPDSPDR RVTAVALPAA
160 170 180 190 200
TVAVHNAFLR TWLRGPRPGQ GEQLAAALSR RVVWLCALFG VIHQETAPSG
210 220 230 240 250
SPVDLSFSSA QVSLELDDAA APPYAHGSPS PAGRPTANDA ASSGAGAPGS
260 270 280 290 300
WSPAGATAPA GTSSSSDASA GDAAAPPGAA PSGPSSSGGT PSSPDVSADD
310 320 330 340 350
DAATQEAAPS GPQLLRGTPS ALYAPAEDDA ATPEADPPGS SAGAPVGGGV
360 370 380 390 400
DTARGRDVGA DPDGSAAGPG EHGEPALANP RGGVVGGNRT DTVWVGGDAP
410 420
IVVLVPRGGN PADVAERTAR SVYEALRG
Length:428
Mass (Da):43,581
Last modified:June 10, 2008 - v1
Checksum:i0BD71F63150B1D30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009152 Genomic DNA Translation: BAG30444.1
RefSeqiWP_012399165.1, NC_010617.1

Genome annotation databases

EnsemblBacteriaiBAG30444; BAG30444; KRH_20970
GeneIDi35827537
KEGGikrh:KRH_20970

Entry informationi

Entry nameiB2GHG8_KOCRD
AccessioniPrimary (citable) accession number: B2GHG8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: April 25, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health