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B2GHG8 (B2GHG8_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:KRH_20970 EMBL BAG30444.1
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeKocuria

Protein attributes

Sequence length428 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains HTH tetR-type DNA-binding domain. SAAS SAAS001647

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B2GHG8 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 0BD71F63150B1D30

FASTA42843,581
        10         20         30         40         50         60 
MSEASAVTED VVTRSIRMLA DHGYMETTVE QLAQAAGISR ATFFRKYGSK EDVVFADHAA 

        70         80         90        100        110        120 
TLERLEALLQ RPGLSPQDGL VEGAQLVFRH NLDHAQRAFA RHDLLQRVES LRDREIAMSS 

       130        140        150        160        170        180 
RYERVFHAFL RAALPDSPDR RVTAVALPAA TVAVHNAFLR TWLRGPRPGQ GEQLAAALSR 

       190        200        210        220        230        240 
RVVWLCALFG VIHQETAPSG SPVDLSFSSA QVSLELDDAA APPYAHGSPS PAGRPTANDA 

       250        260        270        280        290        300 
ASSGAGAPGS WSPAGATAPA GTSSSSDASA GDAAAPPGAA PSGPSSSGGT PSSPDVSADD 

       310        320        330        340        350        360 
DAATQEAAPS GPQLLRGTPS ALYAPAEDDA ATPEADPPGS SAGAPVGGGV DTARGRDVGA 

       370        380        390        400        410        420 
DPDGSAAGPG EHGEPALANP RGGVVGGNRT DTVWVGGDAP IVVLVPRGGN PADVAERTAR 


SVYEALRG 

« Hide

References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009152 Genomic DNA. Translation: BAG30444.1.
RefSeqYP_001855950.1. NC_010617.1.

3D structure databases

ProteinModelPortalB2GHG8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING378753.KRH_20970.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG30444; BAG30444; KRH_20970.
GeneID6239389.
KEGGkrh:KRH_20970.
PATRIC22184560. VBIKocRhi5258_2110.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG116599.
OrthoDBEOG6HB9PG.

Enzyme and pathway databases

BioCycKRHI378753:GJ8F-2154-MONOMER.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
[Graphical view]
PfamPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSPR00455. HTHTETR.
SUPFAMSSF46689. SSF46689. 1 hit.
PROSITEPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2GHG8_KOCRD
AccessionPrimary (citable) accession number: B2GHG8
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: February 19, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)