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B2GH86 (B2GH86_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpiA HAMAP-Rule MF_00147 EMBL BAG29559.1
Ordered Locus Names:KRH_12120
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria ›

Protein attributes

Sequence length271 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1101Electrophile By similarity HAMAP-Rule MF_00147
Active site1821Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site181Substrate By similarity HAMAP-Rule MF_00147
Binding site201Substrate By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
B2GH86 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 9656AEB5358FCDF9

FASTA27129,083
        10         20         30         40         50         60 
MTTQTNGAFD RTPLIAGNWK MNMDHTQGIA LLQKLAWALK DAKHDFSRVE VAVFPPFTDL 

        70         80         90        100        110        120 
RSVQSLVEGD GLSIRYGAQD LSDQDSGAYT GDVSGQFLAK LGCTYALVGH SERRAIHDET 

       130        140        150        160        170        180 
DEVCRDKIRA ALRHGLTPVL CVGEGLDERQ AGRHVEYTLN QLRGSLAELS EGELQGLVVA 

       190        200        210        220        230        240 
YEPVWAIGTG EVAGPEDAQE MCHAIRDELT SLYSGDFAAA TRILYGGSVK SSNVASILSG 

       250        260        270 
ADVDGALVGG ASLDAEEFAK IARFEQHLVT G

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References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009152 Genomic DNA. Translation: BAG29559.1.
RefSeqYP_001855065.1. NC_010617.1.

3D structure databases

ProteinModelPortalB2GH86.
ModBaseSearch...

Protein-protein interaction databases

STRING378753.KRH_12120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG29559; BAG29559; KRH_12120.
GeneID6239703.
KEGGkrh:KRH_12120.
PATRIC22182686. VBIKocRhi5258_1197.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0149.
HOGENOMHOG000226414.
KOK01803.
OMAQEVCGAI.
ProtClustDBPRK00042.

Enzyme and pathway databases

BioCycKRHI378753:GJ8F-1244-MONOMER.
UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2GH86_KOCRD
AccessionPrimary (citable) accession number: B2GH86
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info