B2GH78 (B2GH78_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA EMBL BAG28830.1
Ordered Locus Names:	KRH_04830

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria

Protein attributes

Sequence length	446 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase PIRNR PIRNR000185 EMBL BAG28830.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	126	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	B2GH78 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: B0B6FD8D4315467E	FASTA	446	48,249
	10 20 30 40 50 60 MHEKLIPIRQ IITARNPGES EFHQAVDEVF ESLGPVVARH PEVLDSAIVE RICEPERQII 70 80 90 100 110 120 FRVPWVDDQG EVHINRGFRV EFNSALGPYK GGLRFHPSVY LGIVKFLGFE QIFKNALTGM 130 140 150 160 170 180 PIGGGKGGSD FDPSGRSDAE IMRFCQSFMT ELYRHIGEYT DVPAGDIGVG GREIGYLFGQ 190 200 210 220 230 240 YKRITNRYES GVLTGKGLSW GGSLVRTEAT GYGAVMFAEE MLKTQGKTFE GRDVIVSGSG 250 260 270 280 290 300 NVAIYAIERA QSLGAKALTA SDSGGYVVDK DGIDLDLLKQ IKEVERGRMS DYAERRGSSA 310 320 330 340 350 360 TYVAGGSVWD VPGSVALPCA TQNELNGRQA KTLLENGVVA VAEGANMPCT TDAVHLFQES 370 380 390 400 410 420 DVLFAPGKAA NAGGVATSAL EMQQNASRDS WSFEHTQDRL QEIMRGIHET CAETADEYGM 430 440 PGNYVAGANI SGFIKVARAM VAQGII

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed: 18408034] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG28830.1.
RefSeq	YP_001854336.1. NC_010617.1.
3D structure databases
ProteinModelPortal	B2GH78.
ModBase	Search...
Protein-protein interaction databases
STRING	B2GH78.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6237951.
GenomeReviews	Gene locus KRH_04830 in contig AP009152_GR.
KEGG	krh:KRH_04830.
PATRIC	22181196. VBIKocRhi5258_0473.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG590661.
OMA	KGLTYGG.
ProtClustDB	PRK09414.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2GH78_KOCRD

Accession

Primary (citable) accession number: B2GH78

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)