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B2GH44 (B2GH44_KOCRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Penicillin-binding protein EMBL BAG28796.1
Gene names
Ordered Locus Names:KRH_04490
OrganismKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]
Taxonomic identifier378753 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria ›

Protein attributes

Sequence length713 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentpeptidoglycan-based cell wall

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

penicillin binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2GH44 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: CF5581A6FA9D2858

FASTA71375,779
        10         20         30         40         50         60 
MASRNNSGSE PTSVLGNVVA FIAVAVVTGV VAAGLLVPPA AAAGLAANAS VGWFKSLPAN 

        70         80         90        100        110        120 
MESGPVSEAS TVVAKDGTEV AKFFAQNRDP VPLDQISPNM RNALLSIEDR DFYDHGGVDP 

       130        140        150        160        170        180 
WGIVRAMGNN LLRPSTRQGA STITQQYVNN LIIDQQVRAG EQASTIGADK GVVDKIKEIK 

       190        200        210        220        230        240 
LALSMEQEKS KDEILEGYLN IVLFGGSNYG VEAASQYFWG IPASKLSIAQ SATLAGMVQS 

       250        260        270        280        290        300 
PNYYNPEVNP EASTQRRNVV LDTMVQTGSI TQQQADQAAK EPMKLDIHHT NSGCSAAKTA 

       310        320        330        340        350        360 
PYFCDYVENE VMQSDSFGTT PEERLATLQR GGLTIRTTLD PKAQKAADTQ VNATQPKDNN 

       370        380        390        400        410        420 
PDSVSTSLIS LEPGNGHIVS MAQNTNYSAA EGMSNTTYNF NVDTSMGGAG GFQVGSTFKP 

       430        440        450        460        470        480 
FTLAQWINSG KGVKASIDAR RLSYPADYQW KASCLPNGYK IEPGTDGNGL SFQNATEGYN 

       490        500        510        520        530        540 
KVMDVDYGIY NSINSALYAM AADLDLCQIG EITKALGIHD GKTGDPVDTT VLSSLLGGSA 

       550        560        570        580        590        600 
DISPMTMARA FSAFANDGMM CEPRSITRVT DRSGKNYSVP GDKCQQVIKK EVAQGVNYVL 

       610        620        630        640        650        660 
EQVIVKGSAY QRGIGLPNAS AAKTGTTDNS TQTWMLGYTK GLSTASWVGN YQSGSRSLNG 

       670        680        690        700        710 
LNIGGKRGGS GTEWVDGATY AGSQWQNYMK EIAPNYSTAP FSDPPSNVLS TRK

« Hide

References

[1]"Complete genome sequence of the soil actinomycete Kocuria rhizophila."
Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009152 Genomic DNA. Translation: BAG28796.1.
RefSeqYP_001854302.1. NC_010617.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING378753.KRH_04490.

Protein family/group databases

CAZyGT51. Glycosyltransferase Family 51.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG28796; BAG28796; KRH_04490.
GeneID6237922.
KEGGkrh:KRH_04490.
PATRIC22181124. VBIKocRhi5258_0437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0744.
HOGENOMHOG000041139.
OMARIAPMES.
ProtClustDBCLSK2801392.

Enzyme and pathway databases

BioCycKRHI378753:GJ8F-459-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR001264. Glyco_trans_51.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF00912. Transgly. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2GH44_KOCRD
AccessionPrimary (citable) accession number: B2GH44
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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