B2GGY4 (B2GGY4_KOCRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative GntR family transcriptional regulator EMBL BAG30350.1

Gene names

Ordered Locus Names:

KRH_20030

Organism

Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) [Complete proteome] [HAMAP]

Taxonomic identifier

378753 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Kocuria › Kocuria rhizophila

Protein attributes

Sequence length	122 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. SAAS SAAS000524 RuleBase RU000706

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000524 RuleBase RU000706
Ligand	DNA-binding SAAS SAAS000524 RuleBase RU000706
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GGY4 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 7FFF0FBB497F2D0C	FASTA	122	13,217
	10 20 30 40 50 60 MFTVDPHSTT PVYAQLVECV LRDVSTGELV VGDRIPPVRT LASELGLSAG TVAKAYRQME 70 80 90 100 110 120 TRGIIETRGR KGTFIAQGRD DREGAAARAA AAYLDVVAGQ LHYSPEECMA LVERALDRRA AR

References

[1]

"Complete genome sequence of the soil actinomycete Kocuria rhizophila." Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S., Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. J. Bacteriol. 190:4139-4146(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9341 / DSM 348 / NBRC 103217 / DC2201.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009152 Genomic DNA. Translation: BAG30350.1.
RefSeq	YP_001855856.1. NC_010617.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	378753.KRH_20030.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG30350; BAG30350; KRH_20030.
GeneID	6238904.
KEGG	krh:KRH_20030.
PATRIC	22184358. VBIKocRhi5258_2013.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1725.
HOGENOM	HOG000259573.
OMA	PEECMAL.
Enzyme and pathway databases
BioCyc	KRHI378753:GJ8F-2056-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00392. GntR. 1 hit. [Graphical view]
SMART	SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2GGY4_KOCRD

Accession

Primary (citable) accession number: B2GGY4

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)