B2GCC7 (B2GCC7_LACF3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase EMBL BAG27309.1

Gene names

Ordered Locus Names:

LAF_0973

Organism

Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) [Complete proteome] [HAMAP]

Taxonomic identifier

334390 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004507
Sequence similarities	Belongs to the trans-sulfuration enzymes family. RuleBase RU004079

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU004507
Molecular function	Lyase EMBL BAG27309.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2GCC7 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: C29A14FBF6879CD7	FASTA	380	41,042
	10 20 30 40 50 60 MKFNTQLIHG GISEDPTTGA VSTPIYRSST FRQHVLGGGP KWEYARTGNP TRASLELLMA 70 80 90 100 110 120 QLEEGVAGFA FASGSAAIHA VFSLYSSGDH FIVGKDVYGG TFRLINKVLK RFGLEFTVVD 130 140 150 160 170 180 TQDLAAVEAA VQDNTVAIYF ETPTNPLLEV SDIEAIAKIA KKHGLKTVID NTFATPYNQR 190 200 210 220 230 240 PLTLGADIVV HSATKYLGGH SDVVGGIAVT NDEEIAEQLA FIQNSIGAVL GPDDSWLLMR 250 260 270 280 290 300 GIKTLGARMR IHHENTAAVI ELLEKDPRVA RVLYPGLPDF PGHDIAAKQM DHFGAMVSFE 310 320 330 340 350 360 LQAGLSAKKF VESLQVITLA ESLGGIESLI EVPAVMTHGS IPREVRLQNG IKDELIRLSV 370 380 GIEDEEDLVA DLQQALDQLS

References

[1]

"Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production." Morita H., Toh H., Fukuda S., Horikawa H., Oshima K., Suzuki T., Murakami M., Hisamatsu S., Kato Y., Takizawa T., Fukuoka H., Yoshimura T., Itoh K., O'Sullivan D.J., McKay L.L., Ohno H., Kikuchi J., Masaoka T., Hattori M. DNA Res. 15:151-161(2008) [PubMed: 18487258] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBRC 3956 / LMG 18251.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008937 Genomic DNA. Translation: BAG27309.1.
RefSeq	YP_001843789.1. NC_010610.1.
3D structure databases
ProteinModelPortal	B2GCC7.
ModBase	Search...
Protein-protein interaction databases
STRING	B2GCC7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6232025.
GenomeReviews	Gene locus LAF_0973 in contig AP008937_GR.
KEGG	lfe:LAF_0973.
PATRIC	22226182. VBILacFer15497_1077.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG754729.
OMA	KVASAHG.
ProtClustDB	CLSK912399.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2GCC7_LACF3

Accession

Primary (citable) accession number: B2GCC7

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)