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B2GAA1 (B2GAA1_LACF3) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-galactosidase large subunit EMBL BAG26583.1
Gene names
Ordered Locus Names:LAF_0247
OrganismLactobacillus fermentum (strain NBRC 3956 / LMG 18251) [Complete proteome] [HAMAP] EMBL BAG26583.1
Taxonomic identifier334390 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus ›

Protein attributes

Sequence length626 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase SAAS SAAS023230
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2GAA1 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: D5C2409E3364D716

FASTA62672,279
        10         20         30         40         50         60 
MEAELKWLDD PEVFRVNQLP AHSDHRFYRD QEEAALEKSS YVQNLNGRWG FKFSKNPMER 

        70         80         90        100        110        120 
PVDFYKLDFD RNDFGEIEVP SEIELSNFAQ INYTNITMPW TGKIYRRPAY TLGDNKEEGS 

       130        140        150        160        170        180 
FSQGQDNTVG SYVRHFTLAE GLKNHDVHVV FEGVERAMYV WLNGHFIGYA EDSFTPSEFD 

       190        200        210        220        230        240 
LTPYLVDGDN LLAVEVYKHA TSSWIEDQDM FRFSGIFRDV NLVAQPSIHV QDLKINARVA 

       250        260        270        280        290        300 
DDMKTGSLGL VLKMVGQPGS VQVEVADQTG AAVLNRQLNA DGNWTMAPVQ LVGIHLWDNH 

       310        320        330        340        350        360 
HPYLYQLTLT VRDATGRVVE VIPYQFGFRR VEIDQDKVLR LNGKRLIING VNRHEWNCHR 

       370        380        390        400        410        420 
GRAVTIEDMH TDLGIFKENN INAVRTSHYP DQIPWYYLCD REGIYMMAEN NLESHATWQK 

       430        440        450        460        470        480 
FGQDEPSYNV PGSLPQWKEA VVDRARSNYE IFKNHTAILF WSVGNESYAG EDILAMNNYY 

       490        500        510        520        530        540 
KEVDDTRPVH YEGVVHTKEY RDQISDFESW MYLPPKEVEA YLKKNPDKPF IECEYMHSMG 

       550        560        570        580        590        600 
NSVGGMGSYI KLLDKYPQYC GGFIWDFVDQ AIEVVDPVTG QKSMRYGGDF DDHHADNEFS 

       610        620 
GDGICFADRT PKPAMQEVKY YYGLHK

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References

[1]"Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production."
Morita H., Toh H., Fukuda S., Horikawa H., Oshima K., Suzuki T., Murakami M., Hisamatsu S., Kato Y., Takizawa T., Fukuoka H., Yoshimura T., Itoh K., O'Sullivan D.J., McKay L.L., Ohno H., Kikuchi J., Masaoka T., Hattori M.
DNA Res. 15:151-161(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBRC 3956 / LMG 18251.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008937 Genomic DNA. Translation: BAG26583.1.
RefSeqYP_001843063.1. NC_010610.1.

3D structure databases

ProteinModelPortalB2GAA1.
ModBaseSearch...

Protein-protein interaction databases

STRING334390.LAF_0247.

Protein family/group databases

CAZyGH2. Glycoside Hydrolase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG26583; BAG26583; LAF_0247.
GeneID6232392.
KEGGlfe:LAF_0247.
PATRIC22224530. VBILacFer15497_0278.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3250.
HOGENOMHOG000111236.
KOK01190.
OMAPEVFRVN.
ProtClustDBCLSK912517.

Enzyme and pathway databases

BioCycLFER334390:GJ2S-248-MONOMER.

Family and domain databases

Gene3D2.60.40.320. 1 hit.
3.20.20.80. 1 hit.
InterProIPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF49303. Glyco_hydro_2Ig. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2GAA1_LACF3
AccessionPrimary (citable) accession number: B2GAA1
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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