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B2G6R4 (B2G6R4_LACRJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP-dependent Clp protease ATP-binding subunit ClpX HAMAP-Rule MF_00175
Gene names
Name:clpX HAMAP-Rule MF_00175
Ordered Locus Names:LAR_0630
OrganismLactobacillus reuteri (strain JCM 1112) [Complete proteome] [HAMAP] EMBL BAG25146.1
Taxonomic identifier557433 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus ›

Protein attributes

Sequence length416 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Subunit structure

Heterodimer of ClpP and ClpX By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Sequence similarities

Belongs to the ClpX chaperone family. HAMAP-Rule MF_00175

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Zinc finger13 – 3826C4-type By similarity HAMAP-Rule MF_00175
Nucleotide binding118 – 1258ATP By similarity HAMAP-Rule MF_00175

Sequences

Sequence LengthMass (Da)Tools
B2G6R4 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 288194492CD42282

FASTA41645,970
        10         20         30         40         50         60 
MFEDTTGMDS VHCSFCGKSQ DEVKKIVAGP GVYICNECVD LCKQIIDQEL AEDEAKKAFR 

        70         80         90        100        110        120 
VPTPGEIVNE LDDYVIGQGD AKKTLAVAVY NHYKRVNAMM SGDNNDTELQ KSNIAVIGPT 

       130        140        150        160        170        180 
GSGKTYLAQS LARILNVPFA IADATTLTEA GYVGEDVENI ILKLLQAADF DVERAEKGII 

       190        200        210        220        230        240 
YIDEIDKIAK KSENVSITRD VSGEGVQQAL LKILEGTIAN VPPQGGRKHP QQEFIQVDTK 

       250        260        270        280        290        300 
NILFIVGGAF DGIETIVKER LGDKTIGFGT DSREAEEVTD KNILQHVIPE DLLKFGLIPE 

       310        320        330        340        350        360 
FIGRLPVMTA LEKLDEDDLV RILTEPKNAL VKQYQELIRL DGSQLTFTDG ALRAMAQLAI 

       370        380        390        400        410 
KRNTGARGLR SIIEDVMRDV MFDLPSRKDV EKVIIDKRCV TQHTEPRYVL KDEKAS

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References

[1]"Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production."
Morita H., Toh H., Fukuda S., Horikawa H., Oshima K., Suzuki T., Murakami M., Hisamatsu S., Kato Y., Takizawa T., Fukuoka H., Yoshimura T., Itoh K., O'Sullivan D.J., McKay L.L., Ohno H., Kikuchi J., Masaoka T., Hattori M.
DNA Res. 15:151-161(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 1112.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP007281 Genomic DNA. Translation: BAG25146.1.
RefSeqYP_001841626.1. NC_010609.1.

3D structure databases

ProteinModelPortalB2G6R4.
SMRB2G6R4. Positions 11-50.
ModBaseSearch...

Protein-protein interaction databases

STRING557433.LAR_0630.
B2G6R4.

Proteomic databases

PRIDEB2G6R4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG25146; BAG25146; LAR_0630.
GeneID6230564.
KEGGlrf:LAR_0630.
PATRIC22258601. VBILacReu111271_0673.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1219.
HOGENOMHOG000010093.
KOK03544.
OMAIMFEVPS.
ProtClustDBPRK05342.

Enzyme and pathway databases

BioCycLREU557433:GHNR-631-MONOMER.

Family and domain databases

HAMAPMF_00175. ClpX.
InterProIPR003593. AAA+_ATPase.
IPR013093. ATPase_AAA-2.
IPR019489. Clp_ATPase_C.
IPR004487. Clp_protease_ATP-bd_su_ClpX.
IPR010603. Znf_CppX_C4.
[Graphical view]
PANTHERPTHR11262:SF4. PTHR11262:SF4. 1 hit.
PfamPF07724. AAA_2. 1 hit.
PF10431. ClpB_D2-small. 1 hit.
PF06689. zf-C4_ClpX. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
SM01086. ClpB_D2-small. 1 hit.
SM00994. zf-C4_ClpX. 1 hit.
[Graphical view]
TIGRFAMsTIGR00382. clpX. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2G6R4_LACRJ
AccessionPrimary (citable) accession number: B2G6R4
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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