SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B2FSA7

- B2FSA7_STRMK

UniProt

B2FSA7 - B2FSA7_STRMK

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Putative DNA ligase family protein

Gene
Smlt2530
Organism
Stenotrophomonas maltophilia (strain K279a)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMAL522373:GJE8-2452-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase family proteinImported
Gene namesi
Ordered Locus Names:Smlt2530Imported
OrganismiStenotrophomonas maltophilia (strain K279a)Imported
Taxonomic identifieri522373 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group
ProteomesiUP000008840: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi522373.Smlt2530.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiDISNESM.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2FSA7-1 [UniParc]FASTAAdd to Basket

« Hide

MSLVEYRRKR RFDQTREPEP GKALPEGQRA IFVVQLHHAS RRHYDFRLQV    50
GDALKSWAVP KGPSYDPKVK RMAVEVEDHP VDYAAFEGEI PKGQYGGGHV 100
AQFDHGVWAT QGDPEAQLAK GHLRFELFGA KLKGGWHLVR SGKPARQPQW 150
LLFKDDDEFA SDIEADDLLA DVAVAPPEDL KRAGAGKTAK KKLTVVSPTR 200
TRRKNWAKKA LALGKARRAA APSGPFEPQL AKLGDAPPQG GQWVHEIKWD 250
GYRILATVAE GNVQLWSRNA LEWTGKLPEI RDAIAALGLT SAALDGELIA 300
GAGTKEDFNL LQATLSGERQ GVLTYALFDL LHLDGVDIAD APLLERKALL 350
HSVLEGQGRP LAFSSHVQGD GDEAYRLAGE QHFEGIISKR ADRSYHSGRS 400
EDWRKTKQLA SDEFAVVGYT APKGSRTGFG SLLLARPDPK HGWLYVGRVG 450
SGFSDELIGE VSRRIEGGGG RKPTAHVPTQ DTDLRAATWF APRFVVEVFY 500
RGIGGQKLLR QASLKAVRAD KDIADLEDSD RAGKAPAAGG THAPSRPGRR 550
AKKPPATGRT PPALSSPGKI LFPGDGYTKQ EVWDYYAAVM EHLLPEVVDR 600
PLSIIRCPSG TAKPCFFQKH HTAGLELVDP VRLKEESGIN AHYLVVRDAA 650
SLLELVQFNA LEFHPWGSHA EAPDKADRVV FDLDPGPDVP FAEVKKAATD 700
IRKLLAQLQL ESFLRVSGGK GLHVVVPLNP GCDWDLTKRF AKGFADALAQ 750
SEPQRFLATA TKSLRNKRIF VDYLRNGRGA TAVASYSLRA RPGAPVALPI 800
AWGDLAKLKR ADAFTIKDVP AKLKRRRKDP WAGIGEVKQN LARWAQADP 849
Length:849
Mass (Da):93,054
Last modified:June 10, 2008 - v1
Checksum:i6D0B1FCBC7F6848F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM743169 Genomic DNA. Translation: CAQ46010.1.
RefSeqiWP_012480283.1. NC_010943.1.
YP_001972305.1. NC_010943.1.

Genome annotation databases

EnsemblBacteriaiCAQ46010; CAQ46010; Smlt2530.
GeneIDi6393984.
KEGGisml:Smlt2530.
PATRICi23700615. VBISteMal45202_2377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM743169 Genomic DNA. Translation: CAQ46010.1 .
RefSeqi WP_012480283.1. NC_010943.1.
YP_001972305.1. NC_010943.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 522373.Smlt2530.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAQ46010 ; CAQ46010 ; Smlt2530 .
GeneIDi 6393984.
KEGGi sml:Smlt2530.
PATRICi 23700615. VBISteMal45202_2377.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi DISNESM.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci SMAL522373:GJE8-2452-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants."
    Crossman L.C., Gould V.C., Dow J.M., Vernikos G.S., Okazaki A., Sebaihia M., Saunders D., Arrowsmith C., Carver T., Peters N., Adlem E., Kerhornou A., Lord A., Murphy L., Seeger K., Squares R., Rutter S., Quail M.A.
    , Rajandream M.A., Harris D., Churcher C., Bentley S.D., Parkhill J., Thomson N.R., Avison M.B.
    Genome Biol. 9:R74.1-R74.13(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K279aImported.

Entry informationi

Entry nameiB2FSA7_STRMK
AccessioniPrimary (citable) accession number: B2FSA7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: September 3, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi