B2FHL8 (B2FHL8_STRMK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alginate lyase EMBL CAQ45011.1
EC=4.2.2.3 EMBL CAQ45011.1

Gene names

Ordered Locus Names:

Smlt1473

Organism

Stenotrophomonas maltophilia (strain K279a) [Complete proteome] [HAMAP]

Taxonomic identifier

522373 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group

Protein attributes

Sequence length	331 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAQ45011.1
Molecular function	Lyase EMBL CAQ45011.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alginic acid catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL CAQ45011.1
	Chain	22 – 331	310	Potential EMBL CAQ45011.1		PRO_5000341778

Sequences

	Sequence		Length	Mass (Da)
	B2FHL8 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: B3D40DDFE2714589	FASTA	331	36,696
	10 20 30 40 50 60 MSLPLRLALL PTLLASASAF AACPAPPPGQ PDIRAIGYYT DKAGSVIDPA LQQQNKDATA 70 80 90 100 110 120 PLDRYAADVA RMSDDYLRNG DPAAAQCTLS WLGAWADDGA MLGQMIRVNN DQSFYMRQWM 130 140 150 160 170 180 LDAVAMAYLK VHDQANPQQR ARIDPWLQKL ARANLAYWDN PKRRRNNHYY WGGLGVLATG 190 200 210 220 230 240 LATDDDALWQ AGHAAFQKGI DDIQDDGSLP LEMARGQRAL HYHDYALAPL VMMAELARLR 250 260 270 280 290 300 GQDWYASRNH AIDRLARRVI EGSRDPAWFN QHTGAAQLPL QASGWVEFYR LRSPDGGVFD 310 320 330 AAHARGPFHS PRLGGDLTLM ATHGIVRTPL R

References

[1]

"The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants." Crossman L.C., Gould V.C., Dow J.M., Vernikos G.S., Okazaki A., Sebaihia M., Saunders D., Arrowsmith C., Carver T., Peters N., Adlem E., Kerhornou A., Lord A., Murphy L., Seeger K., Squares R., Rutter S., Quail M.A. , Rajandream M.A., Harris D., Churcher C., Bentley S.D., Parkhill J., Thomson N.R., Avison M.B. Genome Biol. 9:R74.1-R74.13(2008) [PubMed: 18419807] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM743169 Genomic DNA. Translation: CAQ45011.1.
RefSeq	YP_001971319.1. NC_010943.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B2FHL8.
Protein family/group databases
CAZy	PL5. Polysaccharide Lyase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6395630.
GenomeReviews	Gene locus Smlt1473 in contig AM743169_GR.
KEGG	sml:Smlt1473.
PATRIC	23698649. VBISteMal45202_1413.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG701480.
OMA	AAWSVMA.
ProtClustDB	PRK00325.
Family and domain databases
InterPro	IPR008397. Alginate_lyase_dom. IPR008929. Chondroitin_lyas. [Graphical view]
Gene3D	G3DSA:1.50.10.110. Alginate_lyase. 1 hit.
KO	K01729.
Pfam	PF05426. Alginate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2FHL8_STRMK

Accession

Primary (citable) accession number: B2FHL8

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)