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Protein
Submitted name:

Sucrose phosphate synthase

Gene

spsA

Organism
Halothermothrix orenii
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Submitted name:
Sucrose phosphate synthaseImported
Gene namesi
Name:spsAImported
OrganismiHalothermothrix oreniiImported
Taxonomic identifieri31909 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaHalanaerobialesHalanaerobiaceaeHalothermothrix

Interactioni

Protein-protein interaction databases

STRINGi373903.Hore_18210.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2R60X-ray1.80A1-496[»]
ProteinModelPortaliB2CCB8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiB2CCB8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 232189Sucrose_synthInterPro annotationAdd
BLAST
Domaini258 – 435178Glycos_transf_1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108FV0. Bacteria.
COG0438. LUCA.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
[Graphical view]
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2CCB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRIKHVAFL NPQGNFDPAD SYWTEHPDFG GQLVYVKEVS LALAEMGVQV
60 70 80 90 100
DIITRRIKDE NWPEFSGEID YYQETNKVRI VRIPFGGDKF LPKEELWPYL
110 120 130 140 150
HEYVNKIINF YREEGKFPQV VTTHYGDGGL AGVLLKNIKG LPFTFTGHSL
160 170 180 190 200
GAQKMEKLNV NTSNFKEMDE RFKFHRRIIA ERLTMSYADK IIVSTSQERF
210 220 230 240 250
GQYSHDLYRG AVNVEDDDKF SVIPPGVNTR VFDGEYGDKI KAKITKYLER
260 270 280 290 300
DLGSERMELP AIIASSRLDQ KKNHYGLVEA YVQNKELQDK ANLVLTLRGI
310 320 330 340 350
ENPFEDYSRA GQEEKEILGK IIELIDNNDC RGKVSMFPLN SQQELAGCYA
360 370 380 390 400
YLASKGSVFA LTSFYEPFGL APVEAMASGL PAVVTRNGGP AEILDGGKYG
410 420 430 440 450
VLVDPEDPED IARGLLKAFE SEETWSAYQE KGKQRVEERY TWQETARGYL
460 470 480 490
EVIQEIADRK DEEDEGGSLN IPDYFTNPGA SNDEKLLDTF NKLWKE
Length:496
Mass (Da):56,455
Last modified:May 20, 2008 - v1
Checksum:iB15075BD8209F8DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU404188 Genomic DNA. Translation: ACB11221.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU404188 Genomic DNA. Translation: ACB11221.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2R60X-ray1.80A1-496[»]
ProteinModelPortaliB2CCB8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi373903.Hore_18210.

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4108FV0. Bacteria.
COG0438. LUCA.

Miscellaneous databases

EvolutionaryTraceiB2CCB8.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
[Graphical view]
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Expression, purification and preliminary crystallographic analysis of sucrose phosphate synthase (SPS) from Halothermothrix orenii."
    Huynh F., Tan T.C., Swaminathan K., Patel B.K.
    Acta Crystallogr. F 61:116-117(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The structure of sucrose phosphate synthase from Halothermothrix orenii reveals its mechanism of action and binding mode."
    Chua T.K., Bujnicki J.M., Tan T.C., Huynh F., Patel B.K., Sivaraman J.
    Plant Cell 20:1059-1072(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).
  3. "Analysis of a region of the Halothermothrix orenii genome encoding an alpha amylase (amyB) and expression, purification and characterization of recombinant AmyB."
    Mijits B.N., Patel B.K.C.
    Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB2CCB8_9FIRM
AccessioniPrimary (citable) accession number: B2CCB8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 16, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.