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B2BXJ1 (B2BXJ1_ARALL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

Glutathione-s-transferase 4 EMBL EFH57308.1
Gene names
Name:GSTU4 EMBL ABW81028.1
ORF Names:ARALYDRAFT_320713 EMBL EFH57308.1
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome] EMBL ABW81028.1
Taxonomic identifier81972 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Contains GST N-terminal domain. SAAS SAAS010987

Ontologies

Keywords
   Molecular functionTransferase EMBL ABW81028.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processmetabolic process

Inferred from electronic annotation. Source: GOC

   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2BXJ1 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 72F7F231435274D4

FASTA21525,049
        10         20         30         40         50         60 
MSENNELTNF VELRPFPALK LKGINYDYVE EKFESKSSLL LALNPIHKKV PVLVHNGKTI 

        70         80         90        100        110        120 
LESHVILEYI DETWPHNPIL PQDPYKRSKA RFFAKLVDEH ITNVGFVSMA KADEKGRQVL 

       130        140        150        160        170        180 
VEQIRELIMY LEKELIEKDY FGGKSVGFLD FLAGSLIPFC WEGRGLQVIT EEKFPEYNKW 

       190        200        210 
VKNLEKVEIV KDCIPPREKP VEHMNYMAKR IRSSL 

« Hide

References

« Hide 'large scale' references
[1]"Evolution of a short chain dehydrogenase (tropinone-reductase-like) gene family in the Brassicaceae."
Schmid K.J., Navarro-Quezada A.
Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]US DOE Joint Genome Institute (JGI-PGF)
Ottilar R., Schmutz J., Salamov A., Cheng J.F., Lucas S., Pitluck S., Gundlach H., Guo Y., Haberer G., Nasrallah J., Mayer K.F.X., van de Peer Y., Weigel D., Grigoriev I.V.
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"The basis of rapid genome size change in Arabidopsis."
US DOE Joint Genome Institute (JGI-PGF)
Bakker E., Bergelson J., Cheng J.Fang., Clark R.M., Fawcett J., Gaut B., Grigoriev I., Gundlach H., Guo Y., Haberer G., Hollister J., Hu T.T., Mayer K.F.X., Nasrallah J., Nordborg M., Otillar R., Pattyn P., Schmutz J. expand/collapse author list , Spannagl M., van de Peer Y., Wang X., Weigel D., Yang L.
Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change."
Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. expand/collapse author list , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.
Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. MN47.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU162608 Genomic DNA. Translation: ABW81028.1.
GL348716 Genomic DNA. Translation: EFH57308.1.
RefSeqXP_002881049.1. XM_002881003.1.

3D structure databases

ProteinModelPortalB2BXJ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING59689.fgenesh1_pm.C_scaffold_4000770.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsfgenesh1_pm.C_scaffold_4000770; fgenesh1_pm.C_scaffold_4000770; fgenesh1_pm.C_scaffold_4000770.
GeneID9317116.
KEGGaly:ARALYDRAFT_320713.

Phylogenomic databases

KOK00799.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2BXJ1_ARALL
AccessionPrimary (citable) accession number: B2BXJ1
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 19, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)