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B2AXC1

- B2AXC1_PODAN

UniProt

B2AXC1 - B2AXC1_PODAN

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Protein

DNA ligase

Gene

PODANS_7_10060

Organism
Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PODANS_7_10060Imported
OrganismiPodospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)Imported
Taxonomic identifieri515849 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesLasiosphaeriaceaePodospora
ProteomesiUP000001197: Chromosome 7

Structurei

3D structure databases

ProteinModelPortaliB2AXC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00384. AT_hook. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2AXC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPPKGSRQAT LGKFFTQANG AAIPEPKVAA QNKTQTKLSF STKVGGEQSP
60 70 80 90 100
KRKKKDEEEE VSSDAEGGEE GGKPVEKKKK RGRPAKAAII TTTEKKTRKK
110 120 130 140 150
EVDEDGDESM EDAEPAQKKA RKGRRRVVRD EEDGDESMED APAPVEDGRV
160 170 180 190 200
SSPEGYQYEK GSEPRMLNAT PKKRQGKKVR QDEKEWNLGV ESPEGYDYKG
210 220 230 240 250
GSPPKLFKGD RLVAVGGKKV GKEEAGKKEG EKAGKKAVEK EEEEVVKEGE
260 270 280 290 300
ETASSASDVE MEEEEEEEKP EVVKKARQKV QATLKSADEH PFPDWKAGEP
310 320 330 340 350
VPYAALCTTF SLVELTTKRL EIMAHCALFL RQVLRLTPDD LLPVVLLMIN
360 370 380 390 400
KLAPDYAGIE LGIGESLIMK AIGESTGRSL AIIKQDQKEI GDLGLVAVKS
410 420 430 440 450
RSTQPTMFKP KPLTVRGVLK GLMGIATTTG NGAQGRKVDG IKKLLSQADA
460 470 480 490 500
NGAKKVDITK DKGGPSEAKY LVRFLEGKLR LGLAEKSVIV SLSQAVVAHE
510 520 530 540 550
AAQKGVAPSA ADFEKGEAIL KTVYSELPSY DVIIPAMVEH GIMNLRDHCK
560 570 580 590 600
LRPGVPLKPM LANPTKAITE VLDRFENKLF TCEYKYDGER AQIHYVAKDT
610 620 630 640 650
AEELSQSAAN ASKEVGNGVA AIFSRNSEDL SKKYPDVLAK LSTWVKDDTK
660 670 680 690 700
SFVLDCESVA WDVDEKKVLP FQQLMTRKKK DVKIEEVKVK VCVFAFDLLY
710 720 730 740 750
LNGEAVVNKS LRERRELLHK SFTPVEGEFA FATSMNGQEL DEIQTFLDES
760 770 780 790 800
VKASCEGLMV KMLDGEESGY EPSKRSRNWL KKDYLAGIGD SLDLVVLGAY
810 820 830 840 850
FGKGKRTSVY GAFLLACYNP GTDMYETVCN IGTGFSEAVL EELHAQLSKI
860 870 880 890 900
TIDRPKPFYA HSSGGQHQPD VWFEPKYVWE VKTADLTLSP RYKAGMKEGV
910 920 930 940 950
DPTGEKGISL RFPRFIKVRD DKKPDEATSS RQVAEMYRKQ ESVSKSKGPS

VDDDFEY
Length:957
Mass (Da):105,637
Last modified:May 20, 2008 - v1
Checksum:i33F730B7C1A5E5A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633900 Genomic DNA. Translation: CAP69045.1.
FO904942 Genomic DNA. Translation: CDP32522.1.
RefSeqiXP_001908372.1. XM_001908337.1.

Genome annotation databases

GeneIDi6192108.
KEGGipan:PODANSg5407.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633900 Genomic DNA. Translation: CAP69045.1 .
FO904942 Genomic DNA. Translation: CDP32522.1 .
RefSeqi XP_001908372.1. XM_001908337.1.

3D structure databases

ProteinModelPortali B2AXC1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 6192108.
KEGGi pan:PODANSg5407.

Phylogenomic databases

KOi K10747.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR017956. AT_hook_DNA-bd_motif.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00384. AT_hook. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S / ATCC MYA-4624 / DSM 980 / FGSC 10383Imported and S mat+Imported.
  2. Genoscope - CEA
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: S mat+Imported.
  3. Genoscope - CEA
    Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Maintaining two mating types: Structure of the mating type locus and its role in heterokaryosis in Podospora anserina."
    Grognet P., Bidard F., Kuchly C., Chan Ho Tong L., Coppin E., Ait Benkhali J., Couloux A., Wincker P., Debuchy R., Silar P.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB2AXC1_PODAN
AccessioniPrimary (citable) accession number: B2AXC1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 26, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3