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B2AXC1 (B2AXC1_PODAN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length957 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B2AXC1 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 33F730B7C1A5E5A1

FASTA957105,637
        10         20         30         40         50         60 
MPPKGSRQAT LGKFFTQANG AAIPEPKVAA QNKTQTKLSF STKVGGEQSP KRKKKDEEEE 

        70         80         90        100        110        120 
VSSDAEGGEE GGKPVEKKKK RGRPAKAAII TTTEKKTRKK EVDEDGDESM EDAEPAQKKA 

       130        140        150        160        170        180 
RKGRRRVVRD EEDGDESMED APAPVEDGRV SSPEGYQYEK GSEPRMLNAT PKKRQGKKVR 

       190        200        210        220        230        240 
QDEKEWNLGV ESPEGYDYKG GSPPKLFKGD RLVAVGGKKV GKEEAGKKEG EKAGKKAVEK 

       250        260        270        280        290        300 
EEEEVVKEGE ETASSASDVE MEEEEEEEKP EVVKKARQKV QATLKSADEH PFPDWKAGEP 

       310        320        330        340        350        360 
VPYAALCTTF SLVELTTKRL EIMAHCALFL RQVLRLTPDD LLPVVLLMIN KLAPDYAGIE 

       370        380        390        400        410        420 
LGIGESLIMK AIGESTGRSL AIIKQDQKEI GDLGLVAVKS RSTQPTMFKP KPLTVRGVLK 

       430        440        450        460        470        480 
GLMGIATTTG NGAQGRKVDG IKKLLSQADA NGAKKVDITK DKGGPSEAKY LVRFLEGKLR 

       490        500        510        520        530        540 
LGLAEKSVIV SLSQAVVAHE AAQKGVAPSA ADFEKGEAIL KTVYSELPSY DVIIPAMVEH 

       550        560        570        580        590        600 
GIMNLRDHCK LRPGVPLKPM LANPTKAITE VLDRFENKLF TCEYKYDGER AQIHYVAKDT 

       610        620        630        640        650        660 
AEELSQSAAN ASKEVGNGVA AIFSRNSEDL SKKYPDVLAK LSTWVKDDTK SFVLDCESVA 

       670        680        690        700        710        720 
WDVDEKKVLP FQQLMTRKKK DVKIEEVKVK VCVFAFDLLY LNGEAVVNKS LRERRELLHK 

       730        740        750        760        770        780 
SFTPVEGEFA FATSMNGQEL DEIQTFLDES VKASCEGLMV KMLDGEESGY EPSKRSRNWL 

       790        800        810        820        830        840 
KKDYLAGIGD SLDLVVLGAY FGKGKRTSVY GAFLLACYNP GTDMYETVCN IGTGFSEAVL 

       850        860        870        880        890        900 
EELHAQLSKI TIDRPKPFYA HSSGGQHQPD VWFEPKYVWE VKTADLTLSP RYKAGMKEGV 

       910        920        930        940        950 
DPTGEKGISL RFPRFIKVRD DKKPDEATSS RQVAEMYRKQ ESVSKSKGPS VDDDFEY 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU633900 Genomic DNA. Translation: CAP69045.1.
RefSeqXP_001908372.1. XM_001908337.1.

3D structure databases

ProteinModelPortalB2AXC1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6192108.
KEGGpan:PODANSg5407.

Phylogenomic databases

KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR017956. AT_hook_DNA-bd_motif.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00384. AT_hook. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2AXC1_PODAN
AccessionPrimary (citable) accession number: B2AXC1
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 11, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)