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Protein

DNA ligase

Gene

PODANS_7_6470

Organism
Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PODANS_7_6470Imported
OrganismiPodospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)Imported
Taxonomic identifieri515849 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesLasiosphaeriaceaePodospora
ProteomesiUP000001197: Chromosome 7

Structurei

3D structure databases

ProteinModelPortaliB2AWA2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10777.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR021536. DNA_ligase_IV_dom.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF11411. DNA_ligase_IV. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2AWA2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDCKPGSSAA AGAAAAAVPG KTRFGKAKKK TGGVNYHEQR RHIIERFMSQ
60 70 80 90 100
WRKEVGDDFY PAMRLILPDK DRDRGVYGLK ESGIGKMLVR VMKIGRDSED
110 120 130 140 150
GYSLLHWKLP GGGGGNQRFG GKGQPGTAGD FAGRVLEVVG KRAMRGTPGG
160 170 180 190 200
WTIGEVNVLL DRLAGASGEE EQLPIFEEIY RNCCAEEVMW LVRIILKDMR
210 220 230 240 250
VGATERTFLG LWHPDAEALF SVSSSLRRVC WELWDPETRL EQKETGVSLM
260 270 280 290 300
QCFQPQLAQF QMTTGFGKLV QNLGVTEEEK EFWIEEKLDG ERMQMHMKED
310 320 330 340 350
ETVPGGFRFA FWSRKAKDYT YLYGEGLEDD NSALTRHLKN AFHDGVRELI
360 370 380 390 400
LDGEMITWDP EIDKIVPFGT LKTAALDQQK NPFQNGPRPL YRVFDILLLN
410 420 430 440 450
KKPLADYTLR DRHAALEAAV RGEHRRLEIH PYESATTPDA IEPFLRRVVA
460 470 480 490 500
EASEGLILKN PRSRYQLNSR NNDWIKVKPE YMSEYGESLD CVIIGGYFGS
510 520 530 540 550
GRRGGILSSF LCGVRVSENH VRSGAALTRE KCLSFCKVGG GLKAEDYAEI
560 570 580 590 600
RHHTEGKWQD WQASNPPTDY IELAGGKMQY EKPDVWIRPS ESVVMSIKAA
610 620 630 640 650
SIGPSDQFAM GWTLRFPRFR KLRLDKSWDE GMDASDFVLL KDKVKEEEKE
660 670 680 690 700
RKAMEMESRK RKPAKRLKKE LVIAGTDPNA APVEFAEGGD NIKAEPMSQV
710 720 730 740 750
AFPPPQARRK SDNQLFQGLD FCVLSEAVKP RKMSKPDLEK LIKEHGGRIH
760 770 780 790 800
QQVDKGGNMI LLAEKNVVRV ASLKRAGDAD IVKPKWVFDC LAQNNGEGYL
810 820 830 840 850
LPFEEGHLFH ATEEMVKLAA ENTDQYGDSY VRDVTPDELR DIIDDMRTKG
860 870 880 890 900
GVKEEEDAFH DDRTGEFDAE HFLDQLEERG RGLEGLKSFL FRRCRVYFPV
910 920 930 940 950
AAKEEEEEEK SGPSSTELKA VKLQNEVKFG NGTVVGGLDD KEITHVVVVG
960 970 980 990
DGEKERKELA ASVRYEVSSR RHVPRIVTGR WVEDCVKEGT LVDEEGYAP
Length:999
Mass (Da):112,670
Last modified:May 20, 2008 - v1
Checksum:i739CA3115035B4CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633900 Genomic DNA. Translation: CAP68676.1.
RefSeqiXP_001908003.1. XM_001907968.1.

Genome annotation databases

GeneIDi6192594.
KEGGipan:PODANSg5038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633900 Genomic DNA. Translation: CAP68676.1.
RefSeqiXP_001908003.1. XM_001907968.1.

3D structure databases

ProteinModelPortaliB2AWA2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6192594.
KEGGipan:PODANSg5038.

Phylogenomic databases

KOiK10777.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR021536. DNA_ligase_IV_dom.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF11411. DNA_ligase_IV. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S / ATCC MYA-4624 / DSM 980 / FGSC 10383Imported.

Entry informationi

Entry nameiB2AWA2_PODAN
AccessioniPrimary (citable) accession number: B2AWA2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 7, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.