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B2AWA2 (B2AWA2_PODAN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length999 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
B2AWA2 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 739CA3115035B4CC

FASTA999112,670
        10         20         30         40         50         60 
MDCKPGSSAA AGAAAAAVPG KTRFGKAKKK TGGVNYHEQR RHIIERFMSQ WRKEVGDDFY 

        70         80         90        100        110        120 
PAMRLILPDK DRDRGVYGLK ESGIGKMLVR VMKIGRDSED GYSLLHWKLP GGGGGNQRFG 

       130        140        150        160        170        180 
GKGQPGTAGD FAGRVLEVVG KRAMRGTPGG WTIGEVNVLL DRLAGASGEE EQLPIFEEIY 

       190        200        210        220        230        240 
RNCCAEEVMW LVRIILKDMR VGATERTFLG LWHPDAEALF SVSSSLRRVC WELWDPETRL 

       250        260        270        280        290        300 
EQKETGVSLM QCFQPQLAQF QMTTGFGKLV QNLGVTEEEK EFWIEEKLDG ERMQMHMKED 

       310        320        330        340        350        360 
ETVPGGFRFA FWSRKAKDYT YLYGEGLEDD NSALTRHLKN AFHDGVRELI LDGEMITWDP 

       370        380        390        400        410        420 
EIDKIVPFGT LKTAALDQQK NPFQNGPRPL YRVFDILLLN KKPLADYTLR DRHAALEAAV 

       430        440        450        460        470        480 
RGEHRRLEIH PYESATTPDA IEPFLRRVVA EASEGLILKN PRSRYQLNSR NNDWIKVKPE 

       490        500        510        520        530        540 
YMSEYGESLD CVIIGGYFGS GRRGGILSSF LCGVRVSENH VRSGAALTRE KCLSFCKVGG 

       550        560        570        580        590        600 
GLKAEDYAEI RHHTEGKWQD WQASNPPTDY IELAGGKMQY EKPDVWIRPS ESVVMSIKAA 

       610        620        630        640        650        660 
SIGPSDQFAM GWTLRFPRFR KLRLDKSWDE GMDASDFVLL KDKVKEEEKE RKAMEMESRK 

       670        680        690        700        710        720 
RKPAKRLKKE LVIAGTDPNA APVEFAEGGD NIKAEPMSQV AFPPPQARRK SDNQLFQGLD 

       730        740        750        760        770        780 
FCVLSEAVKP RKMSKPDLEK LIKEHGGRIH QQVDKGGNMI LLAEKNVVRV ASLKRAGDAD 

       790        800        810        820        830        840 
IVKPKWVFDC LAQNNGEGYL LPFEEGHLFH ATEEMVKLAA ENTDQYGDSY VRDVTPDELR 

       850        860        870        880        890        900 
DIIDDMRTKG GVKEEEDAFH DDRTGEFDAE HFLDQLEERG RGLEGLKSFL FRRCRVYFPV 

       910        920        930        940        950        960 
AAKEEEEEEK SGPSSTELKA VKLQNEVKFG NGTVVGGLDD KEITHVVVVG DGEKERKELA 

       970        980        990 
ASVRYEVSSR RHVPRIVTGR WVEDCVKEGT LVDEEGYAP 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU633900 Genomic DNA. Translation: CAP68676.1.
RefSeqXP_001908003.1. XM_001907968.1.

3D structure databases

ProteinModelPortalB2AWA2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6192594.
KEGGpan:PODANSg5038.

Phylogenomic databases

KOK10777.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR021536. DNA_ligase_IV.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF11411. DNA_ligase_IV. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2AWA2_PODAN
AccessionPrimary (citable) accession number: B2AWA2
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 11, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)