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B2AF11 (B2AF11_PODAN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length857 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B2AF11 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 95684E0CA3EAE3B6

FASTA85795,351
        10         20         30         40         50         60 
MASPAKKRKL NSDTKKAAVP ATKGIQYFFA KQQQNGSSSR TTSEIQQNGS QSEKSDEQLT 

        70         80         90        100        110        120 
DEELARKLQA EWDAEVQASN QRQQQLQPEP NTSPALPAPP SPLKLSVSPK VDTAKSKNTL 

       130        140        150        160        170        180 
SLSSVTAVED QVTATIPLDE SPLTFDPSKY VPQLQESWAA ERGKSSYALL TRCFVLVSST 

       190        200        210        220        230        240 
QSRIKIVDTL VNCLRLLIEG DPNSLLPAVW LATNAISPPY ISMELGLGGS AISKALKQVC 

       250        260        270        280        290        300 
GLDNRALKAM HDRLGDPGDV AFEAKKKQSF TLKKPKPLTI KGVFESLVKI AKTQGQGSGD 

       310        320        330        340        350        360 
IKQRIVDRLL QDARGGEESR YIVRTLCQHT TMLIALSRAF LLSKPPGADF PTREPAELAK 

       370        380        390        400        410        420 
LSKEELAEIW SRGEELVKAS FARHPDYNDL IPVLLDIGIS DELPIRCGLN LHIPLRPMLG 

       430        440        450        460        470        480 
SITRDLSEML TKLQGRDFAC EYKYDGQRAQ VHCDADGKVS IFSRHLELMT DKYPDLVSLV 

       490        500        510        520        530        540 
PKIRGEDVQS FIMEGEVVAV DQTTGELKNF QTLSNRARKD VAVGSITINV CLFAFDLMYL 

       550        560        570        580        590        600 
NGQPLLDRPF RERRDMLRSL FIEIPHHFTW VKSLDATSQD SEPVLTFFKS ALETKCEGIM 

       610        620        630        640        650        660 
VKILDNLPDI PYEDQSAAAG LLDNTKPTTT TTTTNKTPLN PPPPQKRSRR KPLLSTYEPD 

       670        680        690        700        710        720 
KRLDSWLKVK KDYSTSLSSS SEPLDLIPIA AWHGTGRKSQ FWSPFLLAVR NEDVGSLEAV 

       730        740        750        760        770        780 
CKCMSGFTDN FYKANKAYYD PAIEGRTLGK KPGFVEYYGP EPDVWFNPTE VWEVAFADVT 

       790        800        810        820        830        840 
VSPTYTAAVG MVHPDKGLSL RFPRFVRKRE DKGIEEASTS EVLAGLYRKQ EAGPAKRPME 

       850 
EVEKEQEEGE DIMDEDE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU633457 Genomic DNA. Translation: CAP62028.1.
RefSeqXP_001904250.1. XM_001904215.1.

3D structure databases

ProteinModelPortalB2AF11.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6188259.
KEGGpan:PODANSg1268.

Phylogenomic databases

KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2AF11_PODAN
AccessionPrimary (citable) accession number: B2AF11
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 11, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)