Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B2AF11

- B2AF11_PODAN

UniProt

B2AF11 - B2AF11_PODAN

Protein

DNA ligase

Gene

PODANS_5_880

Organism
Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PODANS_5_880Imported
    OrganismiPodospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)Imported
    Taxonomic identifieri515849 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesLasiosphaeriaceaePodospora
    ProteomesiUP000001197: Chromosome 5

    Structurei

    3D structure databases

    ProteinModelPortaliB2AF11.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2AF11-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASPAKKRKL NSDTKKAAVP ATKGIQYFFA KQQQNGSSSR TTSEIQQNGS    50
    QSEKSDEQLT DEELARKLQA EWDAEVQASN QRQQQLQPEP NTSPALPAPP 100
    SPLKLSVSPK VDTAKSKNTL SLSSVTAVED QVTATIPLDE SPLTFDPSKY 150
    VPQLQESWAA ERGKSSYALL TRCFVLVSST QSRIKIVDTL VNCLRLLIEG 200
    DPNSLLPAVW LATNAISPPY ISMELGLGGS AISKALKQVC GLDNRALKAM 250
    HDRLGDPGDV AFEAKKKQSF TLKKPKPLTI KGVFESLVKI AKTQGQGSGD 300
    IKQRIVDRLL QDARGGEESR YIVRTLCQHT TMLIALSRAF LLSKPPGADF 350
    PTREPAELAK LSKEELAEIW SRGEELVKAS FARHPDYNDL IPVLLDIGIS 400
    DELPIRCGLN LHIPLRPMLG SITRDLSEML TKLQGRDFAC EYKYDGQRAQ 450
    VHCDADGKVS IFSRHLELMT DKYPDLVSLV PKIRGEDVQS FIMEGEVVAV 500
    DQTTGELKNF QTLSNRARKD VAVGSITINV CLFAFDLMYL NGQPLLDRPF 550
    RERRDMLRSL FIEIPHHFTW VKSLDATSQD SEPVLTFFKS ALETKCEGIM 600
    VKILDNLPDI PYEDQSAAAG LLDNTKPTTT TTTTNKTPLN PPPPQKRSRR 650
    KPLLSTYEPD KRLDSWLKVK KDYSTSLSSS SEPLDLIPIA AWHGTGRKSQ 700
    FWSPFLLAVR NEDVGSLEAV CKCMSGFTDN FYKANKAYYD PAIEGRTLGK 750
    KPGFVEYYGP EPDVWFNPTE VWEVAFADVT VSPTYTAAVG MVHPDKGLSL 800
    RFPRFVRKRE DKGIEEASTS EVLAGLYRKQ EAGPAKRPME EVEKEQEEGE 850
    DIMDEDE 857
    Length:857
    Mass (Da):95,351
    Last modified:May 20, 2008 - v1
    Checksum:i95684E0CA3EAE3B6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633457 Genomic DNA. Translation: CAP62028.1.
    RefSeqiXP_001904250.1. XM_001904215.1.

    Genome annotation databases

    GeneIDi6188259.
    KEGGipan:PODANSg1268.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633457 Genomic DNA. Translation: CAP62028.1 .
    RefSeqi XP_001904250.1. XM_001904215.1.

    3D structure databases

    ProteinModelPortali B2AF11.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 6188259.
    KEGGi pan:PODANSg1268.

    Phylogenomic databases

    KOi K10747.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S / ATCC MYA-4624 / DSM 980 / FGSC 10383Imported.

    Entry informationi

    Entry nameiB2AF11_PODAN
    AccessioniPrimary (citable) accession number: B2AF11
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3