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Protein

DNA ligase

Gene

PODANS_5_880

Organism
Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PODANS_5_880Imported
OrganismiPodospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina)Imported
Taxonomic identifieri515849 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesLasiosphaeriaceaePodospora
ProteomesiUP000001197: Chromosome 5

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2AF11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPAKKRKL NSDTKKAAVP ATKGIQYFFA KQQQNGSSSR TTSEIQQNGS
60 70 80 90 100
QSEKSDEQLT DEELARKLQA EWDAEVQASN QRQQQLQPEP NTSPALPAPP
110 120 130 140 150
SPLKLSVSPK VDTAKSKNTL SLSSVTAVED QVTATIPLDE SPLTFDPSKY
160 170 180 190 200
VPQLQESWAA ERGKSSYALL TRCFVLVSST QSRIKIVDTL VNCLRLLIEG
210 220 230 240 250
DPNSLLPAVW LATNAISPPY ISMELGLGGS AISKALKQVC GLDNRALKAM
260 270 280 290 300
HDRLGDPGDV AFEAKKKQSF TLKKPKPLTI KGVFESLVKI AKTQGQGSGD
310 320 330 340 350
IKQRIVDRLL QDARGGEESR YIVRTLCQHT TMLIALSRAF LLSKPPGADF
360 370 380 390 400
PTREPAELAK LSKEELAEIW SRGEELVKAS FARHPDYNDL IPVLLDIGIS
410 420 430 440 450
DELPIRCGLN LHIPLRPMLG SITRDLSEML TKLQGRDFAC EYKYDGQRAQ
460 470 480 490 500
VHCDADGKVS IFSRHLELMT DKYPDLVSLV PKIRGEDVQS FIMEGEVVAV
510 520 530 540 550
DQTTGELKNF QTLSNRARKD VAVGSITINV CLFAFDLMYL NGQPLLDRPF
560 570 580 590 600
RERRDMLRSL FIEIPHHFTW VKSLDATSQD SEPVLTFFKS ALETKCEGIM
610 620 630 640 650
VKILDNLPDI PYEDQSAAAG LLDNTKPTTT TTTTNKTPLN PPPPQKRSRR
660 670 680 690 700
KPLLSTYEPD KRLDSWLKVK KDYSTSLSSS SEPLDLIPIA AWHGTGRKSQ
710 720 730 740 750
FWSPFLLAVR NEDVGSLEAV CKCMSGFTDN FYKANKAYYD PAIEGRTLGK
760 770 780 790 800
KPGFVEYYGP EPDVWFNPTE VWEVAFADVT VSPTYTAAVG MVHPDKGLSL
810 820 830 840 850
RFPRFVRKRE DKGIEEASTS EVLAGLYRKQ EAGPAKRPME EVEKEQEEGE

DIMDEDE
Length:857
Mass (Da):95,351
Last modified:May 20, 2008 - v1
Checksum:i95684E0CA3EAE3B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633457 Genomic DNA. Translation: CAP62028.1.
FO904940 Genomic DNA. Translation: CDP29104.1.
RefSeqiXP_001904250.1. XM_001904215.1.

Genome annotation databases

GeneIDi6188259.
KEGGipan:PODANSg1268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633457 Genomic DNA. Translation: CAP62028.1.
FO904940 Genomic DNA. Translation: CDP29104.1.
RefSeqiXP_001904250.1. XM_001904215.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6188259.
KEGGipan:PODANSg1268.

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S / ATCC MYA-4624 / DSM 980 / FGSC 10383Imported and S mat+Imported.
  2. Genoscope - CEA
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: S mat+Imported.
  3. Genoscope - CEA
    Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Maintaining two mating types: Structure of the mating type locus and its role in heterokaryosis in Podospora anserina."
    Grognet P., Bidard F., Kuchly C., Chan Ho Tong L., Coppin E., Ait Benkhali J., Couloux A., Wincker P., Debuchy R., Silar P.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB2AF11_PODAN
AccessioniPrimary (citable) accession number: B2AF11
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 4, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.