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B2A077 (B2A077_OPITP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Oter_4139 EMBL ACB77413.1
OrganismOpitutus terrae (strain DSM 11246 / PB90-1) [Complete proteome] [HAMAP] EMBL ACB77413.1
Taxonomic identifier452637 [NCBI]
Taxonomic lineageBacteriaVerrucomicrobiaOpitutaeOpitutalesOpitutaceaeOpitutus

Protein attributes

Sequence length345 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACB77413.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2A077 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: FC1ED0C478379CC2

FASTA34538,093
        10         20         30         40         50         60 
MAFPLRTDLP PMEAASVDAI PLGDAWQYEP KWDGFRCLAF RDDGEVELRS KAGQPLARYF 

        70         80         90        100        110        120 
PEIVQALAAL RPKRFVLDGE LVVPSGEGLD FDALLQRIHP AASRVKKLAA ETPARLVVFD 

       130        140        150        160        170        180 
LLADERGASL VERPLRERRA ALERFAQKNF PTGADARVRL SPATTELKLA RKWFGAVGAS 

       190        200        210        220        230        240 
LDGLIAKRRD ASYAAGERTA MVKIKPLRTA DCVVGGFRYA EKKKEVGSLL LGLYDADGKL 

       250        260        270        280        290        300 
HHVGFCSGLK AAEKPALTRK LEALVGGPGF TGRAPGGPSR WSTKRSSEWQ PLEPKLVVEV 

       310        320        330        340 
SFDHVTAGRF RHGTSLLRWR PDKAPRQCTL EQLHQKTSRA LAWLR 

« Hide

References

[1]"Complete sequence of Opitutus terrae PB90-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Smidt H., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11246 / PB90-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001032 Genomic DNA. Translation: ACB77413.1.
RefSeqYP_001821013.1. NC_010571.1.

3D structure databases

ProteinModelPortalB2A077.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING452637.Oter_4139.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB77413; ACB77413; Oter_4139.
GeneID6207571.
KEGGote:Oter_4139.
PATRIC22820087. VBIOpiTer17422_4301.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycOTER452637:GHBR-4207-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2A077_OPITP
AccessionPrimary (citable) accession number: B2A077
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)