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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Oter_4139

Organism
Opitutus terrae (strain DSM 11246 / PB90-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciOTER452637:GHBR-4207-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Oter_4139Imported
OrganismiOpitutus terrae (strain DSM 11246 / PB90-1)Imported
Taxonomic identifieri452637 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaeOpitutalesOpitutaceaeOpitutus
ProteomesiUP000007013 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi452637.Oter_4139.

Structurei

3D structure databases

ProteinModelPortaliB2A077.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2A077-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFPLRTDLP PMEAASVDAI PLGDAWQYEP KWDGFRCLAF RDDGEVELRS
60 70 80 90 100
KAGQPLARYF PEIVQALAAL RPKRFVLDGE LVVPSGEGLD FDALLQRIHP
110 120 130 140 150
AASRVKKLAA ETPARLVVFD LLADERGASL VERPLRERRA ALERFAQKNF
160 170 180 190 200
PTGADARVRL SPATTELKLA RKWFGAVGAS LDGLIAKRRD ASYAAGERTA
210 220 230 240 250
MVKIKPLRTA DCVVGGFRYA EKKKEVGSLL LGLYDADGKL HHVGFCSGLK
260 270 280 290 300
AAEKPALTRK LEALVGGPGF TGRAPGGPSR WSTKRSSEWQ PLEPKLVVEV
310 320 330 340
SFDHVTAGRF RHGTSLLRWR PDKAPRQCTL EQLHQKTSRA LAWLR
Length:345
Mass (Da):38,093
Last modified:May 20, 2008 - v1
Checksum:iFC1ED0C478379CC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001032 Genomic DNA. Translation: ACB77413.1.
RefSeqiWP_012376941.1. NC_010571.1.
YP_001821013.1. NC_010571.1.

Genome annotation databases

EnsemblBacteriaiACB77413; ACB77413; Oter_4139.
KEGGiote:Oter_4139.
PATRICi22820087. VBIOpiTer17422_4301.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001032 Genomic DNA. Translation: ACB77413.1.
RefSeqiWP_012376941.1. NC_010571.1.
YP_001821013.1. NC_010571.1.

3D structure databases

ProteinModelPortaliB2A077.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi452637.Oter_4139.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB77413; ACB77413; Oter_4139.
KEGGiote:Oter_4139.
PATRICi22820087. VBIOpiTer17422_4301.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciOTER452637:GHBR-4207-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 11246 / PB90-1Imported.

Entry informationi

Entry nameiB2A077_OPITP
AccessioniPrimary (citable) accession number: B2A077
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 27, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.