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B2A077

- B2A077_OPITP

UniProt

B2A077 - B2A077_OPITP

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Oter_4139

Organism
Opitutus terrae (strain DSM 11246 / PB90-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciOTER452637:GHBR-4207-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Oter_4139Imported
    OrganismiOpitutus terrae (strain DSM 11246 / PB90-1)Imported
    Taxonomic identifieri452637 [NCBI]
    Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaeOpitutalesOpitutaceaeOpitutus
    ProteomesiUP000007013: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi452637.Oter_4139.

    Structurei

    3D structure databases

    ProteinModelPortaliB2A077.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2A077-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFPLRTDLP PMEAASVDAI PLGDAWQYEP KWDGFRCLAF RDDGEVELRS    50
    KAGQPLARYF PEIVQALAAL RPKRFVLDGE LVVPSGEGLD FDALLQRIHP 100
    AASRVKKLAA ETPARLVVFD LLADERGASL VERPLRERRA ALERFAQKNF 150
    PTGADARVRL SPATTELKLA RKWFGAVGAS LDGLIAKRRD ASYAAGERTA 200
    MVKIKPLRTA DCVVGGFRYA EKKKEVGSLL LGLYDADGKL HHVGFCSGLK 250
    AAEKPALTRK LEALVGGPGF TGRAPGGPSR WSTKRSSEWQ PLEPKLVVEV 300
    SFDHVTAGRF RHGTSLLRWR PDKAPRQCTL EQLHQKTSRA LAWLR 345
    Length:345
    Mass (Da):38,093
    Last modified:May 20, 2008 - v1
    Checksum:iFC1ED0C478379CC2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001032 Genomic DNA. Translation: ACB77413.1.
    RefSeqiYP_001821013.1. NC_010571.1.

    Genome annotation databases

    EnsemblBacteriaiACB77413; ACB77413; Oter_4139.
    GeneIDi6207571.
    KEGGiote:Oter_4139.
    PATRICi22820087. VBIOpiTer17422_4301.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001032 Genomic DNA. Translation: ACB77413.1 .
    RefSeqi YP_001821013.1. NC_010571.1.

    3D structure databases

    ProteinModelPortali B2A077.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 452637.Oter_4139.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB77413 ; ACB77413 ; Oter_4139 .
    GeneIDi 6207571.
    KEGGi ote:Oter_4139.
    PATRICi 22820087. VBIOpiTer17422_4301.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci OTER452637:GHBR-4207-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 11246 / PB90-1Imported.

    Entry informationi

    Entry nameiB2A077_OPITP
    AccessioniPrimary (citable) accession number: B2A077
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3