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B1ZY15 (B1ZY15_OPITP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL ACB75214.1
EC=4.2.2.2 EMBL ACB75214.1
Gene names
Ordered Locus Names:Oter_1931
OrganismOpitutus terrae (strain DSM 11246 / PB90-1) [Complete proteome] [HAMAP]
Taxonomic identifier452637 [NCBI]
Taxonomic lineageBacteria › Verrucomicrobia › Opitutae › Opitutales › Opitutaceae › Opitutus

Protein attributes

Sequence length458 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACB75214.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1ZY15 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: EAC4288BF109041C

FASTA45849,479
        10         20         30         40         50         60 
MRLGDPGSGV ANGLRIMCVA MLTHAAVAAE FYVAPDGRDA NPGTIEAPFG SVQRASSAAR 

        70         80         90        100        110        120 
AGDTVFIRGG TYVMSEAQIA GRDGPYACVV MFERSGAPGR PIRYWAYPGE RPVFDFSHVK 

       130        140        150        160        170        180 
PAGRRVTAFR VNGSWLHLRG LEVVGVQVTI KEHTQSICFD NRGSHNVYEA LSLHDGMAIG 

       190        200        210        220        230        240 
LWIGGTASHN LVLNCDAYRN HDPVSEDGLG GNVDGFGYHG KKGSVGNVFR GGRAWFNSDD 

       250        260        270        280        290        300 
GFDFIHAEEA AVIEGCWAFY NGYSPEFRSL ANGNGFKAGG FSRTPVDRLP DPIPRHVVRR 

       310        320        330        340        350        360 
SLAVRNKANG FYANHHVGGL DFIHNTGYRN RVNFNLLGRE PSDNTTLIDG RGHRLKNNLG 

       370        380        390        400        410        420 
FAARENEVAR LDLQRSDASG NSFTLPVEIT AEDFLSVDEA ELTKPRQPNG DLPRVRFLHL 

       430        440        450 
APGSDAIDAG VDIGQPFNGA APDLGAFEAL QPPITAPH

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References

[1]"Complete sequence of Opitutus terrae PB90-1."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Smidt H., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11246 / PB90-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001032 Genomic DNA. Translation: ACB75214.1.
RefSeqYP_001818814.1. NC_010571.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB1ZY15.

Protein family/group databases

CAZyPL9. Polysaccharide Lyase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6206002.
GenomeReviewsGene locus Oter_1931 in contig CP001032_GR.
KEGGote:Oter_1931.
PATRIC22815455. VBIOpiTer17422_2014.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG584769.
OMADSHHNYD.
ProtClustDBCLSK2526703.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1ZY15_OPITP
AccessionPrimary (citable) accession number: B1ZY15
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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