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B1ZUX5 (GLGA_OPITP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Oter_2664
OrganismOpitutus terrae (strain DSM 11246 / PB90-1) [Complete proteome] [HAMAP]
Taxonomic identifier452637 [NCBI]
Taxonomic lineageBacteriaVerrucomicrobiaOpitutaeOpitutalesOpitutaceaeOpitutus

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 480480Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126088

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B1ZUX5 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 7C65A76452A5756E

FASTA48053,243
        10         20         30         40         50         60 
MKIVHVASEL FPYVKTGGLA DAVASLAGML ADSGHEVAVF LPGYRAALEH RDAAAAERRY 

        70         80         90        100        110        120 
RLKVEMGQQY LSGDVRVFSP RPNLSIFLIC REEFFDRRAP YGNGERDYED NSDRFIFFCK 

       130        140        150        160        170        180 
GVVETLRLAD MQADVVHAHD WQAALLPLLL REAERRQGGM LAMKTIFTIH NIAFQGIFPR 

       190        200        210        220        230        240 
AVFARTNLPD ELNSVDGLEY YEQINFMKAG ILFADRVTTV SPRYAEEIQT PEFGCGLDGV 

       250        260        270        280        290        300 
VQTRESDLVG LLNGVDTKVW NPATDPLLPA RYSRADLAGK RVCRAELLKR FGFAPDFDGP 

       310        320        330        340        350        360 
VFGMVCRLAE QKGVDLVLAN QGFFLSQSCR LIVLGAGELR YETAMKALAA RAPNKIALSA 

       370        380        390        400        410        420 
KLDEAMSHLI EAGSDFFLMP SLFEPCGLNQ MYSQIYGTLP IVSRVGGLVD TVIDADQQPE 

       430        440        450        460        470        480 
KGTGLMCEPT SASLLDVLAR AMTLFDDKPR YGTVQQRAMA REFGWNVAAA GYERLYRDTL 

« Hide

References

[1]"Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an abundant inhabitant of rice paddy soil ecosystems."
van Passel M.W., Kant R., Palva A., Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J., Larimer F.W., Land M.L., Hauser L., Kyrpides N., Mikhailova N., Richardson P.P. expand/collapse author list , Janssen P.H., de Vos W.M., Smidt H.
J. Bacteriol. 193:2367-2368(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11246 / PB90-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001032 Genomic DNA. Translation: ACB75945.1.
RefSeqYP_001819545.1. NC_010571.1.

3D structure databases

ProteinModelPortalB1ZUX5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING452637.Oter_2664.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB75945; ACB75945; Oter_2664.
GeneID6206889.
KEGGote:Oter_2664.
PATRIC22816997. VBIOpiTer17422_2771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycOTER452637:GHBR-2717-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_OPITP
AccessionPrimary (citable) accession number: B1ZUX5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways