B1ZPN6 (B1ZPN6_OPITP) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 20.
History...
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Glycoside hydrolase family 16 EMBL ACB74555.1 | ||
| Gene names |
| ||
| Organism | Opitutus terrae (strain DSM 11246 / PB90-1) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 452637 [NCBI] | ||
| Taxonomic lineage | Bacteria › Verrucomicrobia › Opitutae › Opitutales › Opitutaceae › Opitutus |
Protein attributes
| Sequence length | 301 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL ACB74555.1 |
| Molecular function | Hydrolase EMBL ACB74555.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 41 | 41 | Potential EMBL ACB74555.1 | |||||
| Chain | 42 – 301 | 260 | Potential EMBL ACB74555.1 | PRO_5000335422 | ||||
Sequences
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References
| [1] | "Complete sequence of Opitutus terrae PB90-1." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Smidt H., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 11246 / PB90-1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001032 Genomic DNA. Translation: ACB74555.1. |
| RefSeq | YP_001818155.1. NC_010571.1. |
3D structure databases | |
| ProteinModelPortal | B1ZPN6. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | B1ZPN6. |
Protein family/group databases | |
| CAZy | GH16. Glycoside Hydrolase Family 16. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 6206903. |
| GenomeReviews | Gene locus Oter_1270 in contig CP001032_GR. |
| KEGG | ote:Oter_1270. |
| PATRIC | 22814047. VBIOpiTer17422_1319. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG696112. |
| OMA | DEFEGNQ. |
| ProtClustDB | CLSK2326865. |
Family and domain databases | |
| InterPro | IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000757. Glyco_hydro_16. [Graphical view] |
| Gene3D | G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. |
| Pfam | PF00722. Glyco_hydro_16. 1 hit. [Graphical view] |
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | B1ZPN6_OPITP | ||||||||
| Accession | Primary (citable) accession number: B1ZPN6 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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