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B1ZFY0 (B1ZFY0_METPB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) EMBL ACB82592.1
Gene names
Ordered Locus Names:Mpop_4493
OrganismMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) [Complete proteome] [HAMAP]
Taxonomic identifier441620 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length833 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3737 Potential EMBL ACB82592.1
Chain38 – 833796 Potential EMBL ACB82592.1
PRO_5000334761

Sequences

Sequence LengthMass (Da)Tools
B1ZFY0 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 3D3BA6C83E7571A2

FASTA83389,454
        10         20         30         40         50         60 
MLNIVACVTN QHDPGLVAVS AGICLLGCFS TVTLMAEAAG AERRALVPWL IAAAAVFGCS 

        70         80         90        100        110        120 
VWSLHFVAML AFRPSAQAAY GLLPTAASIG IAVTGALIAL LIWCRADHHP LKLAAAGMVM 

       130        140        150        160        170        180 
AAAIAGMHYA GVGAMAANSL LLFDGAYVHA SLGLCAILAV TALARAGDLT GLGRRIEVSL 

       190        200        210        220        230        240 
WLALAICGLH FTGMTALTVA PAAPLEEGGA VLGSTQLGLA VGLVSLVVLA AGLAALLMQR 

       250        260        270        280        290        300 
HLMRRRMDEL SRMRLLGNLA HEVLLIHRDG RVVEINQAGL RLFETTLQEI VGRPLLDLFA 

       310        320        330        340        350        360 
DADAPALLRR SRCRPEELRP EEFEIRTAAG LAVPVELSCR AIEYLGRPAT AVALRDLSQR 

       370        380        390        400        410        420 
RRDEARIRHL ALHDALTDLP NRTLLEERLS LALETAAENG ASVALVYLDL DRFKPVNDFH 

       430        440        450        460        470        480 
GHAAGDALLV QAAKRMLAEL RPTDTLARIG GDEFVIVLAH TRTLAQIAET AARLVAALGR 

       490        500        510        520        530        540 
PFHLEGQNEG EGKSEGKGEG TSEGKSEGLR IEIGASAGIA VYPSDGSTAE TLKRAADTAL 

       550        560        570        580        590        600 
YRVKDEGRGT VRFFEAAMDE QLQARRRIEH ELSGAIPRGE LQLYYQPIVN GRTGEIETFE 

       610        620        630        640        650        660 
ALIRWHHPER GCVPPADFIP LAEQTDQIGR IGAWVLDTAC AAAAAWPHPW RVSVNVSPKQ 

       670        680        690        700        710        720 
FRQPGFAAGV AAVLGRYGLP PGRLVLEITE GVFIQDATMA VEVLTALRTL GVRLALDDFG 

       730        740        750        760        770        780 
TGYSSLSYLQ RFKFDKIKVD QSFVRRLGRH ADTLTIVRAI THLGHNLGLQ VTVEGVETQE 

       790        800        810        820        830 
QLAMLRELGC DQMQGYLFAR PAPMTELSQA GSADRERARL RALFGETSAR ACA

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References

[1]"Complete sequence of chromosome of Methylobacterium populi BJ001."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-705 / NCIMB 13946 / BJ001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001029 Genomic DNA. Translation: ACB82592.1.
RefSeqYP_001927127.1. NC_010725.1.

3D structure databases

ProteinModelPortalB1ZFY0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1ZFY0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6309551.
GenomeReviewsGene locus Mpop_4493 in contig CP001029_GR.
KEGGmpo:Mpop_4493.
PATRIC22566230. VBIMetPop124700_4511.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751764.
OMATERHEAS.
ProtClustDBCLSK2331947.

Family and domain databases

InterProIPR001054. A/G_cyclase.
IPR000160. Diguanylate_cyclase-pred.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR005330. MHYT.
IPR000014. PAS.
IPR013656. PAS_4.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 2 hits.
PF03707. MHYT. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55073. A/G_cyclase. 1 hit.
SSF141868. SSF141868. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. Sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50924. MHYT. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1ZFY0_METPB
AccessionPrimary (citable) accession number: B1ZFY0
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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