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B1ZEY2 (B1ZEY2_METPB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP MF_01201 RuleBase RU000608
EC=5.1.1.1 HAMAP MF_01201 RuleBase RU000608
Gene names
Name:alr HAMAP MF_01201
Ordered Locus Names:Mpop_4410
OrganismMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) [Complete proteome] [HAMAP]
Taxonomic identifier441620 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length363 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site431Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2591Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue431N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B1ZEY2 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: B822520BC2EF6F2A

FASTA36337,679
        10         20         30         40         50         60 
MSGDSFADPG HGARLTVDLA AIAANWRALG ACAPQAECGA VVKADAYGCG LAAVAPALWR 

        70         80         90        100        110        120 
AGCRTFFVAH LSEGIAARKI LPEAAIYVLN GLVPGHAEAF RAHGLRPVLG DRGELLEWAA 

       130        140        150        160        170        180 
ATDGAAPAAL HVDTGMNRLG LRVEEALALA GDPLIARAGI DLVMSHLVSA ERPDDPLNAG 

       190        200        210        220        230        240 
QAEAFARVRD AFPPLRASLA NSSGTCLAAR ARHDLLRPGY ALFGGNPEPG QRNPMRPVVR 

       250        260        270        280        290        300 
LEATILQLRA VEAGESCGYN GRWQAPAPRR LATLSLGYAD GYPRSASNSG HALVGGVPCP 

       310        320        330        340        350        360 
IVGLISMDLI ILDVTDASEA RRGATATLIG DSLDIDTVGQ AAGTIGYEIL TGLGSRYVRS 


YVE

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium populi BJ001."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-705 / NCIMB 13946 / BJ001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001029 Genomic DNA. Translation: ACB82510.1.
RefSeqYP_001927045.1. NC_010725.1.

3D structure databases

ProteinModelPortalB1ZEY2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1ZEY2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6314086.
GenomeReviewsGene locus Mpop_4410 in contig CP001029_GR.
KEGGmpo:Mpop_4410.
PATRIC22566054. VBIMetPop124700_4424.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMASMDLIIL.
ProtClustDBCLSK2331904.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1ZEY2_METPB
AccessionPrimary (citable) accession number: B1ZEY2
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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