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B1ZDS4 (B1ZDS4_METPB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1088 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1ZDS4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 221EEC4E76B6E761

FASTA1,088122,180
        10         20         30         40         50         60 
MIDRSDPQWY RDAIIYQIHV KSFFDSSNDG IGDFEGLTQK LDYVRDLGVT AIWLMPFYPS 

        70         80         90        100        110        120 
PLRDDGYDIA DYRDINPSYG TMEDFRRFVD AAHERGLRVI TELVINHTSD QHPWFQRARE 

       130        140        150        160        170        180 
APAGSPERDF YVWSDTDDKY SDTRIIFLDT EVSNWTWDPV AKQYFWHRFY SHQPDLNFDN 

       190        200        210        220        230        240 
PAVLEAVIEV MRYWLDMGVD GLRLDAIPYL IERDGTNCEN LSETHDVIKA IRAALDVSYP 

       250        260        270        280        290        300 
DRMLLAEANQ WPEETAQYFG DGDECHMAFH FPLMPRMYMA IAREDRHPIT DIMRQTPEIP 

       310        320        330        340        350        360 
EGCQWAIFLR NHDELTLEMV TAEERDYLWS FYAAERRARI NLGIRRRLAP LLENDRRKIE 

       370        380        390        400        410        420 
LMKSLVLSMP GTPVLYYGDE IGMGDNIYLG DRDGVRTPMQ WSPDRNGGFS RANPQKLFLP 

       430        440        450        460        470        480 
SIQDPIYGYD AINVEAQIQA QTSLLNWTRR MIAIRNNSVA LGRGAIQFLY PTNRKVLAWI 

       490        500        510        520        530        540 
REHDNERILC VANLSRAPQA VQLDLSDLRG AIPIELTGGT AFPAIGELPY LLTLPAYGFY 

       550        560        570        580        590        600 
WFSLSVANTG EIGPQPQSPE LFTLVLTGGV ETLIKGRERT AFERTVAPPF IGSRRWFGAK 

       610        620        630        640        650        660 
GSRIKSVQVD DSAIVKDATG EGKFLLPRVA VTLANGERQD YFVPLAVEEG REDETLMDHA 

       670        680        690        700        710        720 
VARVRRGPRT GLLYEAAAAA PFTVALIEAM RDGVTIPSER GSIVFSTTSA YDPEVPFEAA 

       730        740        750        760        770        780 
DVRRLSAEQS NTSIAIGARM MLKLLRRLQP GTHPEIEIGR FLTEQAHFAN TPALLGVVEH 

       790        800        810        820        830        840 
VAEDGTRTAL ALLQKFVLNQ GDAWTLMLEG LRRDFETVVL APESEAPTPE DAFNAHLRWA 

       850        860        870        880        890        900 
ILLGQRTAEL HRAFAIDTDD PAFAVEPFGE ADLAALADDA RYQAARAFKG LDAITAWSPG 

       910        920        930        940        950        960 
SASEALAARR GEVEALIDEL AAGPLRGATK TRIHGDYHLG QVLASEGDLV IVDFEGEPSR 

       970        980        990       1000       1010       1020 
PVEQRRSKST PLRDVAGMLR SFAYGAETVV REIAARFGDS EERARNAAIA WRGMIDAAFL 

      1030       1040       1050       1060       1070       1080 
DGYGQAVAGS RAAVEDAETH RGLLRLSLLT KALYEVDYEV NNRPDWIEIP ARGVLNILDE 


AKRDRASV 

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References

[1]"Complete sequence of chromosome of Methylobacterium populi BJ001."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-705 / NCIMB 13946 / BJ001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001029 Genomic DNA. Translation: ACB80990.1.
RefSeqYP_001925525.1. NC_010725.1.

3D structure databases

ProteinModelPortalB1ZDS4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING441620.Mpop_2835.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB80990; ACB80990; Mpop_2835.
GeneID6310188.
KEGGmpo:Mpop_2835.
PATRIC22562944. VBIMetPop124700_2881.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMARDGTNNE.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2506670.

Enzyme and pathway databases

BioCycMPOP441620:GHMI-2887-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1ZDS4_METPB
AccessionPrimary (citable) accession number: B1ZDS4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)