B1ZAC5 (B1ZAC5_METPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Cytochrome b RuleBase RU003385

Gene names

Ordered Locus Names:

Mpop_2471 EMBL ACB80633.1

Organism

Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) [Complete proteome] [HAMAP] EMBL ACB80633.1

Taxonomic identifier

441620 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium populi

Protein attributes

Sequence length	430 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis By similarity. RuleBase RU003385
Cofactor	Binds 2 heme groups non-covalently By similarity. RuleBase RU003385
Subunit structure	The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein By similarity. RuleBase RU003385
Sequence similarities	Belongs to the cytochrome b family. RuleBase RU003385

Ontologies

Keywords
Biological process	Electron transport Respiratory chain RuleBase RU003385 Transport
Cellular component	Membrane
Domain	Transmembrane RuleBase RU003385
Ligand	Heme RuleBase RU003385 Iron Metal-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	respiratory electron transport chain Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW respiratory chain Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	electron carrier activity Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1ZAC5 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: B0F8AEA07E169385	FASTA	430	47,830
	10 20 30 40 50 60 MSSAHATSTY VPKSRVAKWF ESRLPLVGLV HSSFVAFPVP RNLNYFWTFG AILIAFLGIQ 70 80 90 100 110 120 IITGVWLAMH YDPSSANAFE SVEHIMRDVN YGWLLRYAHA NGASMFFVAV YVHIFRNLYY 130 140 150 160 170 180 GSYKAPREVL YLLGVIIYLL MMATAFLGYT LPWGQMSFWG ATVITNILAA IPVVGDTIQS 190 200 210 220 230 240 LLWGGYSVGN PTINRFFSLH FLLPWMIAGV VVLHVWALHV TGQNNPAGIP IKSSKDAVPF 250 260 270 280 290 300 TPYATIKDVF AVVVFMILFA WFIFYQPNYL GHADNYVPAN PSVTPAHIVP EWYFLPFYAI 310 320 330 340 350 360 LRAVPDKLGG VILMFGAVLI LAFAPWLDTS RVRSCNYRPV YRVFFWVFLV NAILLGWLGA 370 380 390 400 410 420 KPPEGGYVLA SRICTVYYFA HFLIVMPLVG LFETPDRLPG SILETVTGPG KQVSGSGMPA 430 GAAAEPAKRA

References

[1]

"Complete sequence of chromosome of Methylobacterium populi BJ001." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marx C., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-705 / NCIMB 13946 / BJ001.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001029 Genomic DNA. Translation: ACB80633.1.
RefSeq	YP_001925168.1. NC_010725.1.
3D structure databases
ProteinModelPortal	B1ZAC5.
SMR	B1ZAC5. Positions 5-405.
ModBase	Search...
Protein-protein interaction databases
STRING	441620.Mpop_2471.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB80633; ACB80633; Mpop_2471.
GeneID	6312426.
KEGG	mpo:Mpop_2471.
PATRIC	22562232. VBIMetPop124700_2527.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1290.
HOGENOM	HOG000255206.
KO	K00412.
OMA	FFFVAVY.
ProtClustDB	CLSK979894.
Enzyme and pathway databases
BioCyc	MPOP441620:GHMI-2521-MONOMER.
Family and domain databases
Gene3D	1.20.810.10. 1 hit.
InterPro	IPR016175. Cyt_b/b6. IPR005798. Cyt_b/b6_C. IPR005797. Cyt_b/b6_N. IPR027387. Cytb/b6-like. IPR016174. Di-haem_cyt_TM. [Graphical view]
PANTHER	PTHR19271. PTHR19271. 1 hit.
Pfam	PF00032. Cytochrom_B_C. 1 hit. PF13631. Cytochrom_B_N_2. 1 hit. [Graphical view]
SUPFAM	SSF81648. Cytochrome_b/b6_C. 1 hit. SSF81342. Transmembr_di-haem_cytochrome. 1 hit.
PROSITE	PS51003. CYTB_CTER. 1 hit. PS51002. CYTB_NTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1ZAC5_METPB

Accession

Primary (citable) accession number: B1ZAC5

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	May 29, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)