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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

BamMC406_5654

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

BioCyciBAMB398577:G1GBO-5638-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:BamMC406_5654Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001680 Componenti: Chromosome 3

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500277436828 – 589Sequence analysisAdd BLAST562

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini180 – 341Secretin_NInterPro annotationAdd BLAST162

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000214462
KOiK03219
OMAiYLMARIS
OrthoDBiPOG091H00DF

Family and domain databases

Gene3Di3.30.1370.120, 1 hit
InterProiView protein in InterPro
IPR005644 NolW-like
IPR038591 NolW-like_sf
IPR004846 T2SS/T3SS
IPR003522 T3SS_OM_pore_YscC
PfamiView protein in Pfam
PF00263 Secretin, 1 hit
PF03958 Secretin_N, 1 hit
PRINTSiPR01337 TYPE3OMGPROT
TIGRFAMsiTIGR02516 type_III_yscC, 1 hit

Sequencei

Sequence statusi: Complete.

B1Z5Q1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNWARRLGTV ALAAALAFGA TAPVAEAAAV RWKASIVDYE AQGKDIKDVL
60 70 80 90 100
RDFGASQGIP TRIAADVSGT VSGKFHLPPR RFLDTLASSF GFVWYYDGEV
110 120 130 140 150
LDITTAAELQ STLVKLDSAD TGALRDALDR LRISDERFPI VYDSAQGTAL
160 170 180 190 200
VSGPPRYVQM VTNVASRLDN NAAHRSGTQV RVFPLFHAWA HDRTVPIDGR
210 220 230 240 250
QVTLQGVVAV LNGIYHPHMA KAADKRGEGE GGRAAGGVKR NTPINDVNGN
260 270 280 290 300
AYNGPYIPPP VPSGAAGKGM FAGLTGQPSP AVAAAVGEPP PPQNTSTAPA
310 320 330 340 350
SDDQLPVIVA DQRTNSVVIR DTADRMDQYG KLIDRLDVKP QLIEIEAHII
360 370 380 390 400
EIDDDALRQL GVDWTAHNSH IDVQTGTGTL GQNTYNGTLS QNFGQTALAG
410 420 430 440 450
NVLAAATPVG ASVAAVLGDA GRYLMARISA LQETKAAKID ASPKVVTLNN
460 470 480 490 500
IEAVMDNQTQ FFVPVSGYTS GDLYSVSTGI SLRVLPMVVE EDGRTRIKLD
510 520 530 540 550
VAIQDGQLTD RTVSNLPVIQ NSTINTQAFI EEGQALLIAG YRADTATMGV
560 570 580
TGVPGLSKIP LIGALFRTDS RQKSHMERLF LLSPRVISP
Length:589
Mass (Da):62,615
Last modified:May 20, 2008 - v1
Checksum:iB3D47D9DACF21F5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001027 Genomic DNA Translation: ACB68097.1
RefSeqiWP_012372033.1, NC_010557.1

Genome annotation databases

EnsemblBacteriaiACB68097; ACB68097; BamMC406_5654
KEGGibac:BamMC406_5654

Similar proteinsi

Entry informationi

Entry nameiB1Z5Q1_BURA4
AccessioniPrimary (citable) accession number: B1Z5Q1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 28, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health