Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Trehalose synthase

Gene

BamMC406_6321

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB398577:GH38-6409-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Trehalose synthaseImported
Gene namesi
Ordered Locus Names:BamMC406_6321Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001680: Chromosome 3

Interactioni

Protein-protein interaction databases

STRINGi398577.BamMC406_6321.

Structurei

3D structure databases

ProteinModelPortaliB1Z4U0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

B1Z4U0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKREDPLDD VRRAQFPSLA PAGTPRRRRS RRRAPALCAD DPLWYKDAII
60 70 80 90 100
YQVHVKSFYD SNNDGIGDFP GLIMKLDYIA ELGVDTIWLL PFYPSPRRDD
110 120 130 140 150
GYDIADYRDV HPDYGTLADV RRFIREAHAR GIRVITELVI NHTSDQHPWF
160 170 180 190 200
QRARRAKPGS MHRDYYVWSD TDTKYAGTRI IFLDTETSNW THDPVASQYY
210 220 230 240 250
WHRFYSHQPD LNFDNPAVVR EVIQVMRFWL DLGIDGLRLD AVPYLVEREG
260 270 280 290 300
TNNENLPETH AILKRIRATI DAEYPNRMLL AEANQWPEDV QEYFGEENEC
310 320 330 340 350
HMAFHFPLMP RIYMSIASED RFPIIDIMRQ TPALAPSNQW AVFLRNHDEL
360 370 380 390 400
TLEMVTDSER DLLWQTYASD RRARINLGIR RRLAPLMERD RRRIELINSL
410 420 430 440 450
LLSMPGTPVI YYGDELGMGD NIHLGDRDGV RTPMQWSSDR NGGFSRADPE
460 470 480 490 500
LLVLPPVMGA LYGYDAVNVE AQTRDPHSLL NWTRRILSTR RATQSFGRGT
510 520 530 540 550
IRFLRPENRK VLAYLRELEG HETVLCVANL SRASQAVELD LSEFAGRVPI
560 570 580 590 600
EMTSDSAFPP IGQLTYLLTF PPYGFLWFVL SEHGREPSWR QPHAEPLPEY
610 620 630 640 650
VTIVMRRGDA RPDVGQLHTL AHDALASWLT RRRWFASKDR KIGDAWLNVV
660 670 680 690 700
TPMPDEPFQY AEAWVSASDG GVERYVVPLA TAWGGETSHP LFTQLALARV
710 720 730 740 750
RRGHTVGYLT DAFALPAFAR GMLRKLRDGA TVPTSDGGRL DFLPEHALAG
760 770 780 790 800
LDPGDEAEVR WLAAEQSNSS LVIGDAIVLK LVRKVAHGIH PEAEMSRHLT
810 820 830 840 850
RIGYANTATL AGEVVHVDPD GTPHTVAILQ RYVDNQGDAW TRSFDFLRRA
860 870 880 890 900
IDELALPAAG DGDATEVDDE PDALLGYAAF AGIIGTRLGQ LHVALAQPSD
910 920 930 940 950
NPAFAPEAAT PEHVDGWCVD AIASFEHALD VLRTQLDKLD PVNRAAADTL
960 970 980 990 1000
LASRDAAVQA IGELVPRTLD AQCTRIHGDF HLGQVLDVQG DALLIDFEGE
1010 1020 1030 1040 1050
PARALDRRRA KSHPLRDVAG LLRSLSYVSA TAQFAIEKAP PQTAGRKRAL
1060 1070 1080 1090 1100
FDRFGQAAAD RFVECYRAAA DQAPERFVDP RYADRLLALF LIDKASYELC
1110 1120 1130
YEAANRPDWL GVPVGGLAAL IERLLATDRA PDHGGNR
Length:1,137
Mass (Da):128,071
Last modified:May 20, 2008 - v1
Checksum:iCAFD983C23DA8EBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001027 Genomic DNA. Translation: ACB68753.1.
RefSeqiWP_012372638.1. NC_010557.1.
YP_001816306.1. NC_010557.1.

Genome annotation databases

EnsemblBacteriaiACB68753; ACB68753; BamMC406_6321.
GeneIDi6182625.
KEGGibac:BamMC406_6321.
PATRICi19043045. VBIBurAmb82852_6799.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001027 Genomic DNA. Translation: ACB68753.1.
RefSeqiWP_012372638.1. NC_010557.1.
YP_001816306.1. NC_010557.1.

3D structure databases

ProteinModelPortaliB1Z4U0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398577.BamMC406_6321.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB68753; ACB68753; BamMC406_6321.
GeneIDi6182625.
KEGGibac:BamMC406_6321.
PATRICi19043045. VBIBurAmb82852_6799.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Enzyme and pathway databases

BioCyciBAMB398577:GH38-6409-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 3 of Burkholderia ambifaria MC40-6."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.
    , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC40-6Imported.

Entry informationi

Entry nameiB1Z4U0_BURA4
AccessioniPrimary (citable) accession number: B1Z4U0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: February 4, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.