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B1Z4U0 (B1Z4U0_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BamMC406_6321 EMBL ACB68753.1
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB68753.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length1137 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1Z4U0 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: CAFD983C23DA8EBB

FASTA1,137128,071
        10         20         30         40         50         60 
MMKREDPLDD VRRAQFPSLA PAGTPRRRRS RRRAPALCAD DPLWYKDAII YQVHVKSFYD 

        70         80         90        100        110        120 
SNNDGIGDFP GLIMKLDYIA ELGVDTIWLL PFYPSPRRDD GYDIADYRDV HPDYGTLADV 

       130        140        150        160        170        180 
RRFIREAHAR GIRVITELVI NHTSDQHPWF QRARRAKPGS MHRDYYVWSD TDTKYAGTRI 

       190        200        210        220        230        240 
IFLDTETSNW THDPVASQYY WHRFYSHQPD LNFDNPAVVR EVIQVMRFWL DLGIDGLRLD 

       250        260        270        280        290        300 
AVPYLVEREG TNNENLPETH AILKRIRATI DAEYPNRMLL AEANQWPEDV QEYFGEENEC 

       310        320        330        340        350        360 
HMAFHFPLMP RIYMSIASED RFPIIDIMRQ TPALAPSNQW AVFLRNHDEL TLEMVTDSER 

       370        380        390        400        410        420 
DLLWQTYASD RRARINLGIR RRLAPLMERD RRRIELINSL LLSMPGTPVI YYGDELGMGD 

       430        440        450        460        470        480 
NIHLGDRDGV RTPMQWSSDR NGGFSRADPE LLVLPPVMGA LYGYDAVNVE AQTRDPHSLL 

       490        500        510        520        530        540 
NWTRRILSTR RATQSFGRGT IRFLRPENRK VLAYLRELEG HETVLCVANL SRASQAVELD 

       550        560        570        580        590        600 
LSEFAGRVPI EMTSDSAFPP IGQLTYLLTF PPYGFLWFVL SEHGREPSWR QPHAEPLPEY 

       610        620        630        640        650        660 
VTIVMRRGDA RPDVGQLHTL AHDALASWLT RRRWFASKDR KIGDAWLNVV TPMPDEPFQY 

       670        680        690        700        710        720 
AEAWVSASDG GVERYVVPLA TAWGGETSHP LFTQLALARV RRGHTVGYLT DAFALPAFAR 

       730        740        750        760        770        780 
GMLRKLRDGA TVPTSDGGRL DFLPEHALAG LDPGDEAEVR WLAAEQSNSS LVIGDAIVLK 

       790        800        810        820        830        840 
LVRKVAHGIH PEAEMSRHLT RIGYANTATL AGEVVHVDPD GTPHTVAILQ RYVDNQGDAW 

       850        860        870        880        890        900 
TRSFDFLRRA IDELALPAAG DGDATEVDDE PDALLGYAAF AGIIGTRLGQ LHVALAQPSD 

       910        920        930        940        950        960 
NPAFAPEAAT PEHVDGWCVD AIASFEHALD VLRTQLDKLD PVNRAAADTL LASRDAAVQA 

       970        980        990       1000       1010       1020 
IGELVPRTLD AQCTRIHGDF HLGQVLDVQG DALLIDFEGE PARALDRRRA KSHPLRDVAG 

      1030       1040       1050       1060       1070       1080 
LLRSLSYVSA TAQFAIEKAP PQTAGRKRAL FDRFGQAAAD RFVECYRAAA DQAPERFVDP 

      1090       1100       1110       1120       1130 
RYADRLLALF LIDKASYELC YEAANRPDWL GVPVGGLAAL IERLLATDRA PDHGGNR 

« Hide

References

[1]"Complete sequence of chromosome 3 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC40-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001027 Genomic DNA. Translation: ACB68753.1.
RefSeqYP_001816306.1. NC_010557.1.

3D structure databases

ProteinModelPortalB1Z4U0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398577.BamMC406_6321.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB68753; ACB68753; BamMC406_6321.
GeneID6182625.
KEGGbac:BamMC406_6321.
PATRIC19043045. VBIBurAmb82852_6799.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycBAMB398577:GH38-6409-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1Z4U0_BURA4
AccessionPrimary (citable) accession number: B1Z4U0
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)